Variant report

Variant rs11879492
Chromosome Location chr19:52398105-52398106
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52348800-52406800 ZNF genes & repeats Liver Liver
2 chr19:52357800-52407400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:52358200-52407400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
4 chr19:52366800-52406600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:52373200-52406400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
6 chr19:52387600-52404600 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
7 chr19:52388400-52406800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
8 chr19:52388400-52407200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr19:52388600-52404000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
10 chr19:52388800-52406800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
11 chr19:52390000-52398400 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood
12 chr19:52390000-52400400 ZNF genes & repeats HSMM muscle
13 chr19:52390000-52404600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
14 chr19:52390000-52406400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:52390000-52406800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
16 chr19:52390200-52405800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
17 chr19:52390200-52406400 ZNF genes & repeats Brain Substantia Nigra brain
18 chr19:52390400-52398600 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
19 chr19:52390400-52407000 ZNF genes & repeats Primary B cells from peripheral blood blood
20 chr19:52390600-52404000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
21 chr19:52390600-52404200 ZNF genes & repeats Primary T killer memory cells from peripheral blood blood
22 chr19:52390600-52405800 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
23 chr19:52390600-52407000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
24 chr19:52390800-52404800 ZNF genes & repeats Brain Hippocampus Middle brain
25 chr19:52390800-52406600 ZNF genes & repeats Fetal Brain Female brain
26 chr19:52390800-52406800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
27 chr19:52390800-52407400 ZNF genes & repeats GM12878-XiMat blood
28 chr19:52391000-52404800 ZNF genes & repeats Adipose Nuclei Adipose
29 chr19:52391000-52406200 ZNF genes & repeats Dnd41 blood
30 chr19:52391400-52404400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr19:52391400-52404600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
32 chr19:52391400-52404600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
33 chr19:52391400-52405400 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
34 chr19:52391400-52406600 ZNF genes & repeats Primary hematopoietic stem cells blood
35 chr19:52391400-52406600 ZNF genes & repeats Fetal Muscle Leg muscle
36 chr19:52391400-52406600 ZNF genes & repeats HMEC breast
37 chr19:52391400-52406800 ZNF genes & repeats Duodenum Mucosa Duodenum
38 chr19:52391600-52406800 ZNF genes & repeats Primary B cells from cord blood blood
39 chr19:52391800-52401600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr19:52391800-52404800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
41 chr19:52391800-52405800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
42 chr19:52391800-52406600 ZNF genes & repeats Primary T cells from cord blood blood
43 chr19:52391800-52406600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
44 chr19:52391800-52406800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr19:52391800-52407200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
46 chr19:52392000-52398600 ZNF genes & repeats Colon Smooth Muscle Colon
47 chr19:52392000-52401600 ZNF genes & repeats Brain Cingulate Gyrus brain
48 chr19:52392000-52401600 ZNF genes & repeats Fetal Lung lung
49 chr19:52392000-52405600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
50 chr19:52392200-52398400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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