Variant report

Variant rs10420900
Chromosome Location chr19:20149708-20149709
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20145200-20149800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr19:20148400-20150600 Active TSS HUES48 Cell Line embryonic stem cell
3 chr19:20148600-20150800 Active TSS ES-I3 Cell Line embryonic stem cell
4 chr19:20148800-20150600 Active TSS Brain Cingulate Gyrus brain
5 chr19:20148800-20150600 Active TSS Fetal Muscle Trunk muscle
6 chr19:20148800-20150800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:20149000-20149800 Weak transcription Spleen Spleen
8 chr19:20149000-20150600 Active TSS H1 Cell Line embryonic stem cell
9 chr19:20149000-20150600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:20149000-20150800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr19:20149000-20150800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr19:20149000-20150800 Active TSS Brain Germinal Matrix brain
13 chr19:20149000-20151200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr19:20149200-20149800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:20149200-20149800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr19:20149200-20150000 Active TSS HUES6 Cell Line embryonic stem cell
17 chr19:20149200-20150400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr19:20149200-20150400 Active TSS iPS-18 Cell Line embryonic stem cell
19 chr19:20149200-20150400 Active TSS Fetal Muscle Leg muscle
20 chr19:20149200-20150400 Active TSS NHEK skin
21 chr19:20149200-20150600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:20149200-20150600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr19:20149200-20150600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr19:20149200-20150600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr19:20149200-20150600 Active TSS Fetal Brain Female brain
26 chr19:20149200-20150600 Active TSS HSMM muscle
27 chr19:20149200-20150600 Active TSS NHDF-Ad bronchial
28 chr19:20149200-20150800 Active TSS Pancreatic Islets Pancreatic Islet
29 chr19:20149200-20150800 Active TSS HSMMtube muscle
30 chr19:20149200-20151000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr19:20149400-20149800 Flanking Active TSS Primary T cells from cord blood blood
32 chr19:20149400-20149800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr19:20149400-20149800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr19:20149400-20149800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
35 chr19:20149400-20149800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
36 chr19:20149400-20149800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
37 chr19:20149400-20149800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
38 chr19:20149400-20149800 Flanking Active TSS Brain Hippocampus Middle brain
39 chr19:20149400-20149800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
40 chr19:20149400-20149800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
41 chr19:20149400-20149800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
42 chr19:20149400-20150000 Flanking Active TSS Primary B cells from cord blood blood
43 chr19:20149400-20150000 Flanking Active TSS Adipose Nuclei Adipose
44 chr19:20149400-20150400 Active TSS ES-WA7 Cell Line embryonic stem cell
45 chr19:20149400-20150400 Active TSS H9 Cell Line embryonic stem cell
46 chr19:20149400-20150400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
47 chr19:20149400-20150400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr19:20149400-20150400 Active TSS Primary hematopoietic stem cells short term culture blood
49 chr19:20149400-20150400 Active TSS Liver Liver
50 chr19:20149400-20150400 Active TSS Duodenum Smooth Muscle Duodenum

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