Variant report

Variant	rs10441533
Chromosome Location	chr8:92425582-92425583
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10088066	0.82[ASN][1000 genomes]
rs10099661	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10216646	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10504905	0.94[ASN][1000 genomes]
rs13252632	1.00[ASN][1000 genomes]
rs13260353	1.00[ASN][1000 genomes]
rs13261206	1.00[ASN][1000 genomes]
rs13274956	1.00[CHB][hapmap]
rs13278575	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1457052	1.00[JPT][hapmap]
rs1505220	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16912805	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs16912814	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16912889	1.00[ASN][1000 genomes]
rs16912960	1.00[ASN][1000 genomes]
rs16912967	1.00[ASN][1000 genomes]
rs16912969	1.00[ASN][1000 genomes]
rs16913009	0.94[ASN][1000 genomes]
rs16913030	0.94[ASN][1000 genomes]
rs16913033	1.00[ASN][1000 genomes]
rs2135128	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34257386	0.82[ASN][1000 genomes]
rs34667604	1.00[ASN][1000 genomes]
rs35397725	1.00[ASN][1000 genomes]
rs35588710	1.00[ASN][1000 genomes]
rs35765746	1.00[ASN][1000 genomes]
rs4734031	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4734032	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4734035	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4734581	1.00[ASN][1000 genomes]
rs7012492	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72667833	0.82[ASN][1000 genomes]
rs7828102	1.00[CHB][hapmap]
rs7829874	1.00[ASN][1000 genomes]
rs7838815	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs921231	1.00[CHB][hapmap]
rs9297893	1.00[JPT][hapmap]
rs9297895	0.91[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891190	chr8:92354921-92484872	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
2	nsv523642	chr8:92391870-92542963	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
3	nsv1018648	chr8:92399692-92527826	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:92425000-92428200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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