Variant report

Variant	rs72667833
Chromosome Location	chr8:92452756-92452757
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10088066	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10441533	0.82[ASN][1000 genomes]
rs10504905	0.90[EUR][1000 genomes]
rs13252632	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13260353	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13261206	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13268229	0.82[ASN][1000 genomes]
rs13278575	1.00[ASN][1000 genomes]
rs1505220	0.82[ASN][1000 genomes]
rs16912814	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16912889	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16912960	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16912967	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16912969	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16913009	0.91[EUR][1000 genomes]
rs16913030	0.93[EUR][1000 genomes]
rs16913033	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16913807	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16914149	0.82[ASN][1000 genomes]
rs34257386	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34667604	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35397725	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35588710	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35765746	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4734031	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4734032	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4734035	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4734581	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6471282	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67764740	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7012492	1.00[ASN][1000 genomes]
rs7829874	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891190	chr8:92354921-92484872	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
2	nsv523642	chr8:92391870-92542963	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
3	nsv1018648	chr8:92399692-92527826	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:92452200-92452800	Flanking Active TSS	GM12878-XiMat	blood
2	chr8:92452400-92452800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr8:92452400-92452800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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