Variant report
| Variant | rs10441561 |
|---|---|
| Chromosome Location | chr8:65467510-65467511 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs10112058 | 0.99[ASN][1000 genomes] |
| rs10441560 | 1.00[ASN][1000 genomes] |
| rs1376772 | 0.90[ASN][1000 genomes] |
| rs1451868 | 0.86[ASN][1000 genomes] |
| rs4367588 | 1.00[YRI][hapmap] |
| rs4737675 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs7009901 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
| rs73689545 | 0.90[ASN][1000 genomes] |
| rs7831241 | 0.96[ASN][1000 genomes] |
| rs7841976 | 0.99[ASN][1000 genomes] |
| rs9643388 | 0.99[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv534001 | chr8:64992196-65798776 | Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 17 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
