Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10059373	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10478138	0.85[ASN][1000 genomes]
rs13170795	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13178544	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17135859	0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2195367	0.90[ASN][1000 genomes]
rs2416323	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2416324	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2416325	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2416329	0.85[ASN][1000 genomes]
rs34045110	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34783938	0.85[ASN][1000 genomes]
rs34817468	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35552641	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4329014	0.85[ASN][1000 genomes]
rs4705467	0.85[ASN][1000 genomes]
rs66580212	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6881949	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs71577455	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7707681	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599407	chr5:112981528-113029914	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113002000-113007400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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