Variant report

Variant rs1045599
Chromosome Location chr17:15879910-15879911
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15868800-15880000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr17:15870200-15880200 Weak transcription Primary B cells from peripheral blood blood
3 chr17:15870200-15883600 Weak transcription Fetal Heart heart
4 chr17:15870400-15880000 Weak transcription Brain Germinal Matrix brain
5 chr17:15870400-15881200 Weak transcription Fetal Kidney kidney
6 chr17:15870400-15883600 Weak transcription Brain Angular Gyrus brain
7 chr17:15870400-15883800 Weak transcription Gastric stomach
8 chr17:15870400-15902400 Weak transcription Small Intestine intestine
9 chr17:15870600-15880000 Weak transcription Brain Substantia Nigra brain
10 chr17:15870600-15880000 Weak transcription Rectal Smooth Muscle rectum
11 chr17:15870600-15883600 Weak transcription Pancreas Pancrea
12 chr17:15870600-15883800 Weak transcription Fetal Brain Male brain
13 chr17:15870800-15880000 Weak transcription Primary B cells from cord blood blood
14 chr17:15870800-15902400 Weak transcription Esophagus oesophagus
15 chr17:15871600-15880200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr17:15871800-15880000 Weak transcription Primary hematopoietic stem cells blood
17 chr17:15871800-15880200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr17:15872000-15883400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr17:15873200-15902200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr17:15873800-15881200 Weak transcription HepG2 liver
21 chr17:15874600-15880000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr17:15874600-15883600 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr17:15874800-15880000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr17:15874800-15902400 Weak transcription Placenta Amnion Placenta Amnion
25 chr17:15875000-15880000 Weak transcription Psoas Muscle Psoas
26 chr17:15875000-15880600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr17:15875200-15884200 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr17:15875400-15880000 Weak transcription H1 Cell Line embryonic stem cell
29 chr17:15876000-15880000 Weak transcription HSMMtube muscle
30 chr17:15876200-15880000 Weak transcription Colon Smooth Muscle Colon
31 chr17:15876400-15880400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr17:15876600-15885400 Weak transcription Hela-S3 cervix
33 chr17:15876800-15880000 Weak transcription Ovary ovary
34 chr17:15876800-15882200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr17:15876800-15882200 Strong transcription HMEC breast
36 chr17:15876800-15882200 Strong transcription NHEK skin
37 chr17:15877000-15881600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr17:15877200-15880000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr17:15877200-15880600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr17:15877200-15882200 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr17:15877200-15882200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:15877400-15882200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr17:15877400-15882200 Strong transcription Primary T cells from cord blood blood
44 chr17:15877600-15882200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr17:15877600-15882200 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr17:15877600-15882200 Strong transcription HSMM muscle
47 chr17:15877600-15883600 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr17:15877600-15888800 Weak transcription NHDF-Ad bronchial
49 chr17:15877800-15880400 Strong transcription Duodenum Smooth Muscle Duodenum
50 chr17:15877800-15881200 Weak transcription K562 blood

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