Variant report

Variant rs10456734
Chromosome Location chr6:56252236-56252237
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56240400-56252400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:56240600-56252400 Weak transcription Left Ventricle heart
3 chr6:56241200-56252400 Weak transcription Right Ventricle heart
4 chr6:56247400-56263600 Weak transcription Small Intestine intestine
5 chr6:56247800-56252400 Weak transcription Pancreas Pancrea
6 chr6:56247800-56252600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:56247800-56252600 Weak transcription HMEC breast
8 chr6:56247800-56252600 Weak transcription NHEK skin
9 chr6:56250000-56252400 Weak transcription Aorta Aorta
10 chr6:56250000-56252400 Weak transcription Gastric stomach
11 chr6:56250000-56252600 Weak transcription Stomach Smooth Muscle stomach
12 chr6:56250200-56253000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr6:56251000-56253400 Enhancers Colon Smooth Muscle Colon
14 chr6:56251200-56252400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:56251200-56252400 Enhancers Hela-S3 cervix
16 chr6:56251200-56252600 Enhancers Duodenum Smooth Muscle Duodenum
17 chr6:56251600-56253600 Enhancers Fetal Intestine Large intestine
18 chr6:56251600-56253600 Enhancers Fetal Intestine Small intestine
19 chr6:56251600-56253600 Enhancers Rectal Smooth Muscle rectum
20 chr6:56251600-56253600 Enhancers Stomach Mucosa stomach
21 chr6:56251600-56253800 Enhancers Liver Liver
22 chr6:56252000-56252800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr6:56252200-56252800 Enhancers Fetal Lung lung
24 chr6:56252200-56252800 Flanking Active TSS HepG2 liver
25 chr6:56252200-56253200 Enhancers Placenta Placenta
26 chr6:56252200-56253200 Enhancers Skeletal Muscle Female skeletal muscle
27 chr6:56252200-56253400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:56252200-56253400 Enhancers Duodenum Mucosa Duodenum
29 chr6:56252200-56253400 Enhancers Psoas Muscle Psoas
30 chr6:56252200-56253600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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