Variant report

Variant rs10457342
Chromosome Location chr6:118948033-118948034
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118912200-118966200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr6:118920800-118951200 Weak transcription HSMM muscle
3 chr6:118927000-118965000 Weak transcription NHLF lung
4 chr6:118928000-118952000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:118928800-118951800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr6:118928800-118951800 Weak transcription Spleen Spleen
7 chr6:118931600-118970400 Weak transcription NH-A brain
8 chr6:118935600-118951400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr6:118940200-118966400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:118940400-118950200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:118940400-118951800 Weak transcription HMEC breast
12 chr6:118940400-118960600 Weak transcription Colon Smooth Muscle Colon
13 chr6:118940600-118948600 Weak transcription Brain Anterior Caudate brain
14 chr6:118940600-118951400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr6:118940600-118955200 Weak transcription Brain Substantia Nigra brain
16 chr6:118940800-118951400 Weak transcription Left Ventricle heart
17 chr6:118940800-118953400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:118940800-118954800 Weak transcription Lung lung
19 chr6:118940800-118955000 Weak transcription Brain Hippocampus Middle brain
20 chr6:118940800-118960200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr6:118942200-118951400 Weak transcription Liver Liver
22 chr6:118942600-118957600 Weak transcription Pancreas Pancrea
23 chr6:118943800-118951400 Weak transcription Right Atrium heart
24 chr6:118943800-118954800 Weak transcription Muscle Satellite Cultured Cells --
25 chr6:118943800-118970000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr6:118944000-118951000 Weak transcription Small Intestine intestine
27 chr6:118944200-118949200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr6:118944400-118951400 Weak transcription Osteobl bone
29 chr6:118944400-118951800 Weak transcription Gastric stomach
30 chr6:118944400-118961600 Weak transcription Ovary ovary
31 chr6:118945000-118949000 ZNF genes & repeats Primary hematopoietic stem cells blood
32 chr6:118945000-118949400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
33 chr6:118945000-118949600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr6:118945800-118955800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr6:118946000-118948600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
36 chr6:118946000-118949000 ZNF genes & repeats Fetal Muscle Leg muscle
37 chr6:118946200-118955000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr6:118946400-118949000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr6:118946800-118948200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr6:118947000-118948200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
41 chr6:118947200-118948600 Weak transcription Psoas Muscle Psoas
42 chr6:118947200-118950200 ZNF genes & repeats Dnd41 blood
43 chr6:118947200-118953800 Strong transcription Primary B cells from cord blood blood
44 chr6:118947400-118948800 Strong transcription Fetal Lung lung
45 chr6:118947400-118950800 Weak transcription K562 blood
46 chr6:118947400-118951200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr6:118947400-118951400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:118947600-118948400 Strong transcription Primary T helper naive cells from peripheral blood blood
49 chr6:118947600-118948400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr6:118947600-118953800 Strong transcription Primary T cells from cord blood blood

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