Variant report

Variant	rs10458703
Chromosome Location	chr10:18630884-18630885
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10828528	0.82[ASN][1000 genomes]
rs10828533	0.85[CHB][hapmap]
rs10828534	0.87[ASN][1000 genomes]
rs11013700	1.00[MEX][hapmap];0.82[TSI][hapmap]
rs1325992	0.82[CHB][hapmap]
rs4748453	0.89[CHB][hapmap]
rs61839206	0.82[ASN][1000 genomes]
rs7087460	0.82[ASN][1000 genomes]
rs7896075	0.88[GIH][hapmap];0.84[MEX][hapmap]
rs9787537	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046458	chr10:18629603-18683860	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18629400-18631600	Active TSS	Left Ventricle	heart
2	chr10:18629400-18632600	Active TSS	Right Atrium	heart
3	chr10:18629400-18632800	Active TSS	Right Ventricle	heart
4	chr10:18629600-18633000	Active TSS	Fetal Heart	heart
5	chr10:18630000-18633800	Weak transcription	Liver	Liver
6	chr10:18630000-18639200	Weak transcription	Pancreas	Pancrea
7	chr10:18630200-18639200	Weak transcription	Ovary	ovary
8	chr10:18630400-18631000	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr10:18630400-18632200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:18630600-18631000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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