Variant report

Variant	rs7896075
Chromosome Location	chr10:18638273-18638274
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10458703	0.88[GIH][hapmap];0.84[MEX][hapmap]
rs11013700	0.85[MEX][hapmap]
rs11013933	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs11013950	0.81[JPT][hapmap]
rs16917194	0.81[GIH][hapmap]
rs16917244	0.85[MEX][hapmap];1.00[MKK][hapmap]
rs4748453	0.85[CHB][hapmap];0.84[CHD][hapmap];0.90[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046458	chr10:18629603-18683860	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18630000-18639200	Weak transcription	Pancreas	Pancrea
2	chr10:18630200-18639200	Weak transcription	Ovary	ovary
3	chr10:18634800-18640200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr10:18635000-18639200	Weak transcription	Right Ventricle	heart
5	chr10:18635600-18639200	Weak transcription	Left Ventricle	heart
6	chr10:18635800-18640600	Enhancers	Fetal Heart	heart
7	chr10:18638000-18638400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr10:18638000-18639200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr10:18638200-18641000	Weak transcription	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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