The 2.0 version of rSNPBase

Variant report

Variant rs10476777
Chromosome Location chr5:151210205-151210206
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:151183600-151210600 Weak transcription Lung lung
2 chr5:151183800-151213400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr5:151188200-151210400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr5:151190400-151210400 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr5:151192400-151211200 Weak transcription NHLF lung
6 chr5:151193000-151210400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr5:151193200-151210600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr5:151193600-151211400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr5:151194800-151210400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr5:151196600-151210400 Weak transcription Primary T cells fromperipheralblood blood
11 chr5:151196800-151211400 Weak transcription GM12878-XiMat blood
12 chr5:151197000-151211400 Weak transcription NH-A brain
13 chr5:151198200-151210600 Weak transcription Muscle Satellite Cultured Cells --
14 chr5:151200200-151211400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr5:151203800-151210400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr5:151205600-151210800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr5:151205800-151211200 Weak transcription Primary T cells from cord blood blood
18 chr5:151207800-151211600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr5:151207800-151212400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr5:151208800-151210600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:151208800-151210800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr5:151208800-151211000 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr5:151209600-151210600 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr5:151209600-151211800 Enhancers Primary T helper cells fromperipheralblood blood
25 chr5:151209800-151211000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:151209800-151211800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr5:151209800-151211800 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr5:151209800-151212000 Enhancers Primary T helper cells PMA-I stimulated --
29 chr5:151210000-151211800 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr5:151210000-151212000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr5:151210200-151210400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr5:151210200-151210800 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr5:151210200-151211600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015