The 2.0 version of rSNPBase

Variant report

Variant rs10476994
Chromosome Location chr5:151079049-151079050
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:151071600-151080800 Enhancers Fetal Adrenal Gland Adrenal Gland
2 chr5:151075000-151084200 Enhancers Fetal Intestine Large intestine
3 chr5:151075800-151080200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:151076600-151079600 Weak transcription GM12878-XiMat blood
5 chr5:151076600-151080600 Enhancers Fetal Stomach stomach
6 chr5:151076600-151082000 Weak transcription Psoas Muscle Psoas
7 chr5:151076600-151084200 Enhancers Fetal Muscle Leg muscle
8 chr5:151076800-151079800 Enhancers Fetal Muscle Trunk muscle
9 chr5:151077200-151080600 Enhancers Osteobl bone
10 chr5:151077200-151080800 Enhancers NHLF lung
11 chr5:151077400-151086000 Weak transcription Lung lung
12 chr5:151077600-151080800 Enhancers Adipose Nuclei Adipose
13 chr5:151077600-151087200 Weak transcription Spleen Spleen
14 chr5:151077800-151080800 Enhancers Fetal Intestine Small intestine
15 chr5:151078200-151079400 Enhancers Fetal Lung lung
16 chr5:151078200-151079400 Enhancers Ovary ovary
17 chr5:151078200-151080200 Enhancers HUES6 Cell Line embryonic stem cell
18 chr5:151078200-151080200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr5:151078200-151080600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr5:151078200-151080600 Enhancers Skeletal Muscle Male skeletal muscle
21 chr5:151078200-151080600 Enhancers HMEC breast
22 chr5:151078200-151080800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr5:151078200-151080800 Enhancers Cortex derived primary cultured neurospheres brain
24 chr5:151078400-151079200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr5:151078400-151079200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:151078400-151079200 Enhancers Brain Anterior Caudate brain
27 chr5:151078400-151079200 Enhancers Brain Cingulate Gyrus brain
28 chr5:151078400-151079400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:151078400-151079400 Enhancers HUES64 Cell Line embryonic stem cell
30 chr5:151078400-151079400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr5:151078400-151079400 Enhancers Brain Hippocampus Middle brain
32 chr5:151078400-151079400 Enhancers Brain Substantia Nigra brain
33 chr5:151078400-151079400 Enhancers Colon Smooth Muscle Colon
34 chr5:151078400-151079400 Flanking Active TSS Fetal Kidney kidney
35 chr5:151078400-151079400 Enhancers Placenta Placenta
36 chr5:151078400-151079600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:151078400-151079600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr5:151078400-151080000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr5:151078400-151080000 Enhancers Rectal Smooth Muscle rectum
40 chr5:151078400-151080200 Enhancers Hela-S3 cervix
41 chr5:151078400-151080400 Enhancers NHEK skin
42 chr5:151078400-151080600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr5:151078400-151080600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr5:151078400-151080800 Enhancers Placenta Amnion Placenta Amnion
45 chr5:151078600-151079200 Enhancers ES-WA7 Cell Line embryonic stem cell
46 chr5:151078600-151079200 Enhancers H9 Cell Line embryonic stem cell
47 chr5:151078600-151079200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr5:151078600-151079200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr5:151078600-151079200 Flanking Active TSS A549 lung
50 chr5:151078600-151079200 Flanking Active TSS HepG2 liver

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Last update: Aug 31, 2015