The 2.0 version of rSNPBase

Variant report

Variant rs10482659
Chromosome Location chr5:142701967-142701968
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:142658400-142714800 Weak transcription Esophagus oesophagus
2 chr5:142689000-142707600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:142691600-142703400 Weak transcription Spleen Spleen
4 chr5:142692200-142702600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr5:142692400-142710600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr5:142692600-142707000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr5:142693000-142707200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:142693200-142702200 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr5:142693200-142714400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr5:142693400-142721000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr5:142693600-142705200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr5:142693600-142706600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr5:142693800-142702000 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr5:142693800-142702200 Weak transcription Primary T cells from cord blood blood
15 chr5:142693800-142702400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr5:142693800-142702600 Weak transcription Primary T cells fromperipheralblood blood
17 chr5:142693800-142703600 Weak transcription Thymus Thymus
18 chr5:142693800-142703800 Weak transcription Fetal Thymus thymus
19 chr5:142693800-142707200 Weak transcription Fetal Stomach stomach
20 chr5:142693800-142747400 Weak transcription Fetal Muscle Trunk muscle
21 chr5:142695000-142703400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr5:142695800-142703800 Weak transcription Fetal Muscle Leg muscle
23 chr5:142696200-142702600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr5:142696200-142703000 Weak transcription Lung lung
25 chr5:142696200-142704000 Weak transcription Primary B cells from peripheral blood blood
26 chr5:142696400-142708200 Weak transcription Colon Smooth Muscle Colon
27 chr5:142696600-142702400 Weak transcription NH-A brain
28 chr5:142696800-142702000 Weak transcription HSMMtube muscle
29 chr5:142697000-142702200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr5:142697000-142702800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr5:142697000-142705800 Weak transcription Rectal Smooth Muscle rectum
32 chr5:142697200-142704400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr5:142697200-142714600 Weak transcription Placenta Amnion Placenta Amnion
34 chr5:142697200-142720400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr5:142697400-142707400 Weak transcription Ovary ovary
36 chr5:142697600-142702400 Weak transcription HSMM muscle
37 chr5:142697600-142703600 Weak transcription Right Ventricle heart
38 chr5:142697600-142707200 Weak transcription Placenta Placenta
39 chr5:142697800-142703400 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr5:142697800-142703600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:142697800-142711400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr5:142698200-142709200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr5:142698600-142703600 Weak transcription Primary hematopoietic stem cells blood
44 chr5:142698800-142702600 Enhancers Skeletal Muscle Female skeletal muscle
45 chr5:142698800-142704000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr5:142698800-142707400 Weak transcription NHEK skin
47 chr5:142699000-142702200 Weak transcription Muscle Satellite Cultured Cells --
48 chr5:142699000-142720600 Weak transcription Hela-S3 cervix
49 chr5:142699200-142702200 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr5:142699200-142704000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015