Variant report
| Variant | rs10484121 |
|---|---|
| Chromosome Location | chr14:84432262-84432263 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:30)
| rs_ID | r2[population] |
|---|---|
| rs1031786 | 1.00[ASN][1000 genomes] |
| rs10498570 | 1.00[ASN][1000 genomes] |
| rs12432517 | 1.00[ASN][1000 genomes] |
| rs12434328 | 1.00[ASN][1000 genomes] |
| rs12434420 | 1.00[ASN][1000 genomes] |
| rs12435245 | 1.00[ASN][1000 genomes] |
| rs12882862 | 1.00[ASN][1000 genomes] |
| rs12885704 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs12887939 | 1.00[ASN][1000 genomes] |
| rs17623851 | 1.00[ASN][1000 genomes] |
| rs17624978 | 1.00[ASN][1000 genomes] |
| rs17625091 | 1.00[ASN][1000 genomes] |
| rs17654422 | 1.00[ASN][1000 genomes] |
| rs17696913 | 1.00[ASN][1000 genomes] |
| rs17697055 | 1.00[ASN][1000 genomes] |
| rs17703593 | 1.00[ASN][1000 genomes] |
| rs17709419 | 1.00[ASN][1000 genomes] |
| rs34091992 | 1.00[ASN][1000 genomes] |
| rs34339499 | 1.00[ASN][1000 genomes] |
| rs34354494 | 1.00[ASN][1000 genomes] |
| rs35881988 | 1.00[ASN][1000 genomes] |
| rs35941036 | 1.00[ASN][1000 genomes] |
| rs66752331 | 1.00[ASN][1000 genomes] |
| rs71418933 | 1.00[ASN][1000 genomes] |
| rs7145578 | 1.00[ASN][1000 genomes] |
| rs7146489 | 1.00[ASN][1000 genomes] |
| rs7150766 | 1.00[ASN][1000 genomes] |
| rs8008493 | 1.00[ASN][1000 genomes] |
| rs8010059 | 1.00[ASN][1000 genomes] |
| rs8018323 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv902159 | chr14:84336944-84447356 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
| 2 | nsv1039271 | chr14:84405561-84467550 | Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | n/a |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:84419000-84436000 | Weak transcription | Pancreas | Pancrea |
| 2 | chr14:84427800-84436000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
