Variant report

Variant	rs12885704
Chromosome Location	chr14:84526029-84526030
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1031786	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10484121	1.00[ASN][1000 genomes]
rs10498570	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10498571	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12432517	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12434328	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12434420	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12435245	1.00[ASN][1000 genomes]
rs12882862	1.00[ASN][1000 genomes]
rs12887939	1.00[ASN][1000 genomes]
rs17623851	1.00[ASN][1000 genomes]
rs17624978	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17625091	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17654422	1.00[ASN][1000 genomes]
rs17696913	1.00[ASN][1000 genomes]
rs17697055	1.00[ASN][1000 genomes]
rs17703593	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34091992	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34339499	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34354494	1.00[ASN][1000 genomes]
rs35881988	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35941036	1.00[ASN][1000 genomes]
rs66752331	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7145578	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7146489	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7150766	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8008493	1.00[ASN][1000 genomes]
rs8010059	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8018323	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1382	chr14:84487547-84532237	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84525200-84526400	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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