Variant report

Variant	rs10486910
Chromosome Location	chr7:79508582-79508583
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10486912	0.83[AMR][1000 genomes]
rs16886703	0.83[AMR][1000 genomes]
rs16886704	0.83[AMR][1000 genomes]
rs17153072	0.83[AMR][1000 genomes]
rs17153087	0.83[AMR][1000 genomes]
rs17153094	0.83[AMR][1000 genomes]
rs17153180	1.00[AMR][1000 genomes]
rs4352782	0.83[AMR][1000 genomes]
rs4460297	0.83[AMR][1000 genomes]
rs58237209	0.83[AMR][1000 genomes]
rs6944276	0.83[AMR][1000 genomes]
rs6947975	0.83[AMR][1000 genomes]
rs6956324	0.83[AMR][1000 genomes]
rs724336	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888522	chr7:79402551-79619012	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv607675	chr7:79495456-79519229	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:79507600-79509200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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