The 2.0 version of rSNPBase

Variant report

Variant rs10489845
Chromosome Location chr1:159029771-159029772
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158998800-159033800 Weak transcription Fetal Brain Female brain
2 chr1:159001400-159036200 Weak transcription Small Intestine intestine
3 chr1:159009200-159030400 Weak transcription Stomach Smooth Muscle stomach
4 chr1:159022600-159031600 Weak transcription Fetal Brain Male brain
5 chr1:159022800-159037400 Genic enhancers Primary B cells from peripheral blood blood
6 chr1:159024200-159032400 Weak transcription Brain Germinal Matrix brain
7 chr1:159024400-159030800 Weak transcription Placenta Placenta
8 chr1:159025200-159037600 Weak transcription Duodenum Mucosa Duodenum
9 chr1:159025200-159038200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:159025400-159037400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:159025400-159037800 Weak transcription NHDF-Ad bronchial
12 chr1:159025400-159038200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:159025600-159036400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr1:159026000-159030200 Weak transcription HUVEC blood vessel
15 chr1:159026000-159037200 Weak transcription Adipose Nuclei Adipose
16 chr1:159026200-159036400 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:159026200-159037200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:159026200-159037200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:159026200-159037600 Weak transcription Fetal Muscle Leg muscle
20 chr1:159026200-159037600 Weak transcription NHEK skin
21 chr1:159026200-159037800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:159026200-159038000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:159026200-159038600 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:159026400-159034000 Weak transcription NHLF lung
25 chr1:159026400-159034200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:159026400-159037000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:159026400-159037200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:159026400-159037200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:159026400-159037200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:159026400-159037400 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:159026400-159037600 Weak transcription Dnd41 blood
32 chr1:159026800-159037200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:159026800-159038000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:159027000-159030000 Weak transcription Rectal Smooth Muscle rectum
35 chr1:159027000-159031800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:159027000-159037200 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:159027000-159037800 Weak transcription Thymus Thymus
38 chr1:159027000-159038000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:159027200-159029800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:159027200-159031400 Weak transcription GM12878-XiMat blood
41 chr1:159027200-159034600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:159027200-159037000 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:159027200-159037200 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:159027200-159037200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:159027200-159037800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:159027200-159038200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:159027400-159035800 Weak transcription Primary hematopoietic stem cells blood
48 chr1:159027400-159037200 Weak transcription Primary T cells from cord blood blood
49 chr1:159027400-159037200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:159028400-159037200 Weak transcription Esophagus oesophagus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015