Variant report

Variant	rs10505412
Chromosome Location	chr8:122807881-122807882
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10089166	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10093103	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17244386	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28377004	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs28615459	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62525274	0.94[EUR][1000 genomes]
rs62525275	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10505412	WDR67	cis	parietal	SCAN

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122785600-122808400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:122800400-122808800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:122805200-122808800	Enhancers	Fetal Lung	lung
4	chr8:122806800-122812600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr8:122807800-122808400	Weak transcription	Small Intestine	intestine
6	chr8:122807800-122809000	Enhancers	Stomach Mucosa	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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