Variant report

Variant	rs28377004
Chromosome Location	chr8:122844560-122844561
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10093103	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10505412	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17244386	0.89[EUR][1000 genomes]
rs28373700	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28615459	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62525274	0.86[EUR][1000 genomes]
rs62525275	0.83[AMR][1000 genomes]
rs62525278	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122842000-122845200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr8:122842000-122845400	Enhancers	Osteobl	bone
3	chr8:122842200-122845600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr8:122842200-122845800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr8:122842400-122844600	Weak transcription	Fetal Intestine Large	intestine
6	chr8:122842600-122844600	Weak transcription	Fetal Intestine Small	intestine
7	chr8:122842600-122845000	Weak transcription	Fetal Stomach	stomach
8	chr8:122842800-122846200	Enhancers	NHDF-Ad	bronchial
9	chr8:122843000-122848400	Enhancers	Fetal Lung	lung
10	chr8:122843400-122845200	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr8:122843600-122844800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr8:122843800-122844600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr8:122843800-122845000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr8:122844000-122845000	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr8:122844200-122845000	Weak transcription	NHLF	lung
16	chr8:122844200-122853800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr8:122844400-122844800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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