Variant report

Variant	rs10507995
Chromosome Location	chr13:93380513-93380514
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10507996	0.82[CHD][hapmap];0.88[JPT][hapmap]
rs13343226	0.88[JPT][hapmap]
rs1570973	0.86[ASN][1000 genomes]
rs16947855	0.91[CHD][hapmap];1.00[GIH][hapmap];0.88[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.87[YRI][hapmap]
rs16947861	0.82[CHD][hapmap];0.88[JPT][hapmap];0.91[ASN][1000 genomes]
rs16951951	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2892647	0.81[TSI][hapmap]
rs4575403	0.87[GIH][hapmap];0.88[JPT][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.87[YRI][hapmap]
rs7319594	0.86[ASN][1000 genomes]
rs7327567	0.94[ASN][1000 genomes]
rs9561120	1.00[CEU][hapmap]
rs9589634	0.81[TSI][hapmap]
rs9589635	0.81[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869070	chr13:93347616-94286933	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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