Variant report

Variant	rs16951951
Chromosome Location	chr13:93334546-93334547
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10507995	1.00[JPT][hapmap]
rs10507996	1.00[CHB][hapmap];0.88[JPT][hapmap];0.91[YRI][hapmap]
rs13343226	1.00[CHB][hapmap];0.88[JPT][hapmap];0.91[YRI][hapmap]
rs1570973	0.82[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs16947855	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs16947861	1.00[CHB][hapmap];0.88[JPT][hapmap];0.91[YRI][hapmap];0.91[ASN][1000 genomes]
rs4575403	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs72641038	0.86[EUR][1000 genomes]
rs72641042	0.89[EUR][1000 genomes]
rs7319594	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7327567	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456071	chr13:93279563-93377562	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv562745	chr13:93279563-93377562	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv18734	chr13:93279898-93352628	Flanking Active TSS Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv983702	chr13:93291025-93353518	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93330000-93335400	Weak transcription	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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