Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10014209	0.87[CEU][hapmap]
rs1460484	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1585423	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs16871128	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs16871243	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs17464007	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17466300	0.85[MEX][hapmap];0.81[TSI][hapmap]
rs17466461	0.85[MEX][hapmap];0.81[TSI][hapmap]
rs17523974	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap]
rs28850130	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs358584	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs358585	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs358591	1.00[CEU][hapmap]
rs56989378	0.96[ASN][1000 genomes]
rs57335220	0.96[ASN][1000 genomes]
rs60294689	0.96[ASN][1000 genomes]
rs62295500	0.80[EUR][1000 genomes]
rs62301286	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6830109	0.81[TSI][hapmap]
rs6841093	0.81[TSI][hapmap]
rs6846958	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap]
rs73105830	0.96[ASN][1000 genomes]
rs73105834	0.96[ASN][1000 genomes]
rs73105836	0.96[ASN][1000 genomes]
rs73105840	0.96[ASN][1000 genomes]
rs73105849	0.96[ASN][1000 genomes]
rs73105853	0.96[ASN][1000 genomes]
rs73105855	0.96[ASN][1000 genomes]
rs73105858	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013365	chr4:20834054-21609078	Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	nsv829879	chr4:21418568-21611002	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
3	nsv998481	chr4:21421945-21608805	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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