Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:21793571..21796261-chr4:21796696..21799237,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10007968	0.88[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs10008490	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10011276	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10021705	0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10938858	0.90[YRI][hapmap]
rs11930149	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11934163	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12503736	1.00[YRI][hapmap]
rs12509804	0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12643656	0.85[JPT][hapmap]
rs168625	0.92[YRI][hapmap]
rs16871860	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs16871915	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1841186	0.92[YRI][hapmap]
rs1870449	0.91[EUR][1000 genomes]
rs1968778	1.00[YRI][hapmap]
rs2007970	1.00[YRI][hapmap]
rs2007971	0.83[YRI][hapmap]
rs28522334	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35388558	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs41488744	1.00[CEU][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4260532	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4282162	1.00[YRI][hapmap]
rs4328900	0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9999359	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv4269	chr4:21761429-21806056	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv1005221	chr4:21786702-21822000	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21794600-21803000	Weak transcription	Muscle Satellite Cultured Cells	--

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