Variant report

Variant	rs1060544
Chromosome Location	chr7:99613476-99613477
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr7:99612876-99614198	PFSK-1	brain:	n/a	n/a
2	NR2F2	chr7:99613408-99614422	K562	blood:	n/a	n/a
3	MAX	chr7:99612938-99613672	H1-hESC	embryonic stem cell:	n/a	chr7:99613379-99613389 chr7:99613479-99613489
4	POLR2A	chr7:99613371-99613614	A549	lung:	n/a	n/a
5	TAF1	chr7:99613019-99613687	HepG2	liver:	n/a	n/a
6	RELA	chr7:99612662-99614122	GM15510	blood:	n/a	n/a
7	ZBTB7A	chr7:99613206-99613681	K562	blood:	n/a	chr7:99613565-99613574
8	POLR2A	chr7:99613001-99613874	Hela-S3	cervix:	n/a	n/a
9	POLR2A	chr7:99612698-99614087	HUVEC	blood vessel:	n/a	n/a
10	ELF1	chr7:99612901-99613854	GM12878	blood:	n/a	chr7:99613162-99613173 chr7:99613205-99613214 chr7:99613163-99613172 chr7:99613164-99613173 chr7:99613361-99613373
11	MAX	chr7:99612756-99613988	A549	lung:	n/a	chr7:99613379-99613389 chr7:99613479-99613489
12	HCFC1	chr7:99612639-99614089	Hela-S3	cervix:	n/a	n/a
13	CREB1	chr7:99612903-99613657	A549	lung:	n/a	chr7:99613637-99613650
14	YY1	chr7:99613420-99613899	GM12891	blood:	n/a	n/a
15	POLR2A	chr7:99612903-99614013	H1-hESC	embryonic stem cell:	n/a	n/a
16	TCF12	chr7:99612729-99613504	A549	lung:	n/a	chr7:99613018-99613028
17	HMGN3	chr7:99613058-99613629	K562	blood:	n/a	n/a
18	SIN3AK20	chr7:99612978-99613929	K562	blood:	n/a	n/a
19	POLR2A	chr7:99613376-99613673	H1-hESC	embryonic stem cell:	n/a	n/a
20	SIN3AK20	chr7:99612886-99613753	PANC-1	pancreas:	n/a	n/a
21	ELF1	chr7:99612693-99613569	HCT-116	colon:	n/a	chr7:99613162-99613173 chr7:99613205-99613214 chr7:99613163-99613172 chr7:99613164-99613173 chr7:99613361-99613373
22	POLR2A	chr7:99612932-99614539	GM12892	blood:	n/a	n/a
23	GABPA	chr7:99612680-99614345	SK-N-SH	brain:	n/a	n/a
24	ELF1	chr7:99612714-99613624	MCF-7	breast:	n/a	chr7:99613162-99613173 chr7:99613205-99613214 chr7:99613163-99613172 chr7:99613164-99613173 chr7:99613361-99613373
25	POLR2A	chr7:99612922-99613612	K562	blood:	n/a	n/a
26	GABPA	chr7:99612698-99613488	A549	lung:	n/a	n/a
27	FOSL1	chr7:99612841-99613610	HCT-116	colon:	n/a	chr7:99613217-99613228
28	JUND	chr7:99613026-99614387	HepG2	liver:	n/a	chr7:99613217-99613228
29	MAX	chr7:99612935-99613495	ECC-1	luminal epithelium:	n/a	chr7:99613379-99613389 chr7:99613479-99613489
30	POLR2A	chr7:99612825-99613968	K562	blood:	n/a	n/a
31	POLR2A	chr7:99612859-99614615	GM12878	blood:	n/a	n/a
32	HEY1	chr7:99612849-99613830	K562	blood:	n/a	chr7:99613374-99613389 chr7:99613415-99613430
33	MAX	chr7:99612876-99613816	MCF-7	breast:	n/a	chr7:99613379-99613389 chr7:99613479-99613489
34	POLR2A	chr7:99612955-99614254	GM12892	blood:	n/a	n/a
35	PML	chr7:99612952-99614319	K562	blood:	n/a	n/a
36	GABPA	chr7:99612739-99614054	MCF-7	breast:	n/a	n/a
37	TAF1	chr7:99612802-99613980	H1-hESC	embryonic stem cell:	n/a	n/a
38	ATF3	chr7:99612938-99613479	K562	blood:	n/a	n/a
39	POLR2A	chr7:99612690-99613674	PFSK-1	brain:	n/a	n/a
40	POLR2A	chr7:99612892-99614072	GM12891	blood:	n/a	n/a
41	TAF1	chr7:99612942-99614116	K562	blood:	n/a	n/a
42	UBTF	chr7:99612892-99613537	K562	blood:	n/a	n/a
43	E2F6	chr7:99613361-99613547	K562	blood:	n/a	n/a
44	ELF1	chr7:99612873-99613637	K562	blood:	n/a	chr7:99613162-99613173 chr7:99613205-99613214 chr7:99613163-99613172 chr7:99613164-99613173 chr7:99613361-99613373
45	GABPA	chr7:99612778-99613887	K562	blood:	n/a	n/a
46	POLR2A	chr7:99612814-99614441	SK-N-SH	brain:	n/a	n/a
47	MAX	chr7:99613021-99613666	HepG2	liver:	n/a	chr7:99613379-99613389 chr7:99613479-99613489
48	POLR2A	chr7:99612755-99614580	GM12878	blood:	n/a	n/a
49	GABPA	chr7:99612783-99613900	HL-60	blood:	n/a	n/a
50	POLR2A	chr7:99612995-99613560	Gliobla	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:99611884..99615327-chr7:99716112..99720187,5	K562	blood:
2	chr7:99612024..99615373-chr7:99646672..99650813,5	MCF-7	breast:
3	chr1:45196470..45197118-chr7:99613158..99613683,2	Hela-S3	cervix:
4	chr7:99611817..99614127-chr7:99645173..99647750,3	K562	blood:
5	chr10:43133589..43134241-chr7:99612910..99613726,2	NB4	blood:
6	chr7:99611801..99614602-chr7:99679230..99681000,2	MCF-7	breast:
7	chr16:56966049..56966601-chr7:99612783..99613720,2	NB4	blood:
8	chr7:99612131..99615242-chr7:99723277..99726662,3	K562	blood:
9	chr7:99516539..99518815-chr7:99613011..99615072,3	K562	blood:
10	chr7:99588651..99591308-chr7:99612703..99615208,2	K562	blood:
11	chr15:93425219..93426130-chr7:99613026..99613921,3	Hela-S3	cervix:
12	chr7:99612316..99614498-chr7:99678113..99681049,2	MCF-7	breast:
13	chr7:99612325..99614517-chr7:99685585..99687271,2	MCF-7	breast:
14	chr7:99613224..99616757-chr7:99646903..99650456,6	K562	blood:
15	chr7:99611430..99615857-chr7:99675156..99681193,15	K562	blood:
16	chr7:99613156..99613775-chr9:19379852..19380534,2	Hela-S3	cervix:
17	chr7:99612390..99616211-chr7:99697108..99699457,4	K562	blood:
18	chr7:99589288..99591810-chr7:99612834..99614804,4	MCF-7	breast:
19	chr7:99214190..99217311-chr7:99612118..99614634,3	K562	blood:
20	chr7:99612390..99617445-chr7:99697108..99699685,5	K562	blood:
21	chr7:99515716..99518824-chr7:99610446..99615072,4	K562	blood:
22	chr7:99612275..99615910-chr7:99677885..99681193,8	K562	blood:

Variant related genes	Relation type
ZKSCAN1	TF binding region
ENSG00000200169	Chromatin interaction
ENSG00000166508	Chromatin interaction
ENSG00000051108	Chromatin interaction
ENSG00000137154	Chromatin interaction
ENSG00000272373	Chromatin interaction
ENSG00000272888	Chromatin interaction
ENSG00000235713	Chromatin interaction
ENSG00000221838	Chromatin interaction
ENSG00000146833	Chromatin interaction
ENSG00000196693	Chromatin interaction
ENSG00000197037	Chromatin interaction
ENSG00000166529	Chromatin interaction
ENSG00000242798	Chromatin interaction
ENSG00000214309	Chromatin interaction
ENSG00000166526	Chromatin interaction
ENSG00000168090	Chromatin interaction
ENSG00000166997	Chromatin interaction
ENSG00000106290	Chromatin interaction

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1015538	0.83[ASN][1000 genomes]
rs10228764	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10281368	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12705070	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12705071	0.91[EUR][1000 genomes]
rs13223792	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13232115	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1534310	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1880949	0.80[AMR][1000 genomes]
rs1963304	0.83[ASN][1000 genomes]
rs2070215	0.90[EUR][1000 genomes]
rs2293479	0.84[AMR][1000 genomes]
rs34031156	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4134903	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4424195	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4729566	0.83[ASN][1000 genomes]
rs4729576	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs59261051	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6465761	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6465762	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6950205	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6953441	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6974305	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7788746	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:40 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1829865	chr7:99430678-99755141	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1131 gene(s)	inside rSNPs	diseases
2	esv1830649	chr7:99430678-99755141	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1131 gene(s)	inside rSNPs	diseases
3	nsv534298	chr7:99478011-99886076	Flanking Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1132 gene(s)	inside rSNPs	diseases
4	esv1828362	chr7:99530233-99628773	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
5	esv1830255	chr7:99544908-99626331	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
6	esv1832985	chr7:99546856-99615911	Active TSS Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
7	esv1825207	chr7:99552275-99625510	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
8	esv1829545	chr7:99553071-99626386	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
9	esv1825655	chr7:99554378-99626186	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
10	esv1828702	chr7:99554757-99624145	Flanking Active TSS Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
11	esv1831603	chr7:99554769-99624157	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
12	esv1830357	chr7:99562984-99617852	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
13	esv1826636	chr7:99563961-99618606	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
14	nsv433391	chr7:99563961-99618606	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
15	esv1831741	chr7:99563961-99626295	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
16	esv1826723	chr7:99564091-99616038	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
17	esv1826228	chr7:99564091-99625688	Enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
18	esv1830115	chr7:99564091-99625688	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
19	esv19900	chr7:99564133-99625411	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
20	esv1827919	chr7:99564276-99615911	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
21	esv1833207	chr7:99564276-99628466	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
22	esv1827474	chr7:99564291-99626186	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
23	esv32694	chr7:99565608-99629919	Bivalent/Poised TSS Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
24	esv1831013	chr7:99566252-99621841	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
25	esv1828033	chr7:99566252-99634770	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
26	esv1830934	chr7:99566264-99624157	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
27	esv1828426	chr7:99566264-99626343	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
28	esv1827496	chr7:99566264-99634782	Genic enhancers Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
29	esv1827607	chr7:99567455-99614313	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
30	esv1830505	chr7:99567455-99614313	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
31	esv1831989	chr7:99567455-99614313	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
32	esv1833477	chr7:99567455-99614313	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
33	esv1826730	chr7:99567455-99626295	Enhancers Active TSS Flanking Active TSS Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
34	esv1833435	chr7:99567455-99626295	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
35	esv1829558	chr7:99569394-99626331	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
36	nsv469687	chr7:99572543-99755141	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1115 gene(s)	inside rSNPs	diseases
37	nsv482601	chr7:99572543-99755141	Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1115 gene(s)	inside rSNPs	diseases
38	esv1828823	chr7:99583219-99618606	Enhancers Flanking Active TSS Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
39	esv1829649	chr7:99583219-99618606	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
40	esv1826763	chr7:99583219-99626295	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99611200-99613600	Weak transcription	Stomach Mucosa	stomach
2	chr7:99612400-99614200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:99612600-99614200	Active TSS	Duodenum Smooth Muscle	Duodenum
4	chr7:99612600-99614600	Active TSS	Sigmoid Colon	Sigmoid Colon
5	chr7:99612800-99613600	Enhancers	Fetal Heart	heart
6	chr7:99612800-99613800	Active TSS	Adipose Nuclei	Adipose
7	chr7:99612800-99613800	Active TSS	Stomach Smooth Muscle	stomach
8	chr7:99612800-99614000	Active TSS	H9 Cell Line	embryonic stem cell
9	chr7:99612800-99614000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr7:99612800-99614200	Active TSS	HUES48 Cell Line	embryonic stem cell
11	chr7:99612800-99614200	Active TSS	iPS-15b Cell Line	embryonic stem cell
12	chr7:99612800-99614200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr7:99612800-99614200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr7:99612800-99614200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
15	chr7:99612800-99614200	Active TSS	Left Ventricle	heart
16	chr7:99612800-99614200	Active TSS	NHLF	lung
17	chr7:99612800-99614400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr7:99612800-99614400	Active TSS	Fetal Kidney	kidney
19	chr7:99612800-99614600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr7:99612800-99614600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr7:99612800-99614600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr7:99612800-99614600	Active TSS	Psoas Muscle	Psoas
23	chr7:99612800-99614600	Active TSS	Right Ventricle	heart
24	chr7:99612800-99614800	Active TSS	iPS-20b Cell Line	embryonic stem cell
25	chr7:99612800-99615200	Active TSS	HUES64 Cell Line	embryonic stem cell
26	chr7:99613000-99613600	Active TSS	Rectal Smooth Muscle	rectum
27	chr7:99613000-99613800	Active TSS	Primary T cells from cord blood	blood
28	chr7:99613000-99613800	Active TSS	Fetal Stomach	stomach
29	chr7:99613000-99613800	Active TSS	Rectal Mucosa Donor 31	rectum
30	chr7:99613000-99613800	Active TSS	Thymus	Thymus
31	chr7:99613000-99613800	Active TSS	Hela-S3	cervix
32	chr7:99613000-99614000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr7:99613000-99614000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr7:99613000-99614000	Active TSS	Duodenum Mucosa	Duodenum
35	chr7:99613000-99614000	Active TSS	Fetal Lung	lung
36	chr7:99613000-99614000	Active TSS	Rectal Mucosa Donor 29	rectum
37	chr7:99613000-99614000	Active TSS	Skeletal Muscle Female	skeletal muscle
38	chr7:99613000-99614000	Active TSS	GM12878-XiMat	blood
39	chr7:99613000-99614200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr7:99613000-99614200	Active TSS	iPS-18 Cell Line	embryonic stem cell
41	chr7:99613000-99614200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr7:99613000-99614200	Active TSS	Breast Myoepithelial Primary Cells	Breast
43	chr7:99613000-99614200	Active TSS	Brain Angular Gyrus	brain
44	chr7:99613000-99614200	Active TSS	Brain Anterior Caudate	brain
45	chr7:99613000-99614200	Active TSS	Brain Substantia Nigra	brain
46	chr7:99613000-99614200	Active TSS	Colonic Mucosa	Colon
47	chr7:99613000-99614200	Active TSS	Colon Smooth Muscle	Colon
48	chr7:99613000-99614200	Active TSS	Placenta Amnion	Placenta Amnion
49	chr7:99613000-99614200	Active TSS	HSMM	muscle
50	chr7:99613000-99614400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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