The 2.0 version of rSNPBase

Variant report

Variant rs1061955
Chromosome Location chr1:149914357-149914358
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149909200-149915400 Weak transcription Brain Germinal Matrix brain
2 chr1:149909200-149916400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:149909400-149915000 Weak transcription Fetal Brain Female brain
4 chr1:149909400-149947000 Weak transcription Fetal Brain Male brain
5 chr1:149909600-149916400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:149909800-149916600 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr1:149910000-149914400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:149910000-149934200 Weak transcription Primary T cells from cord blood blood
9 chr1:149910200-149914800 Weak transcription Thymus Thymus
10 chr1:149910200-149914800 Weak transcription Spleen Spleen
11 chr1:149910200-149915800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:149910200-149915800 Weak transcription Esophagus oesophagus
13 chr1:149910200-149929800 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:149911000-149916000 Weak transcription Psoas Muscle Psoas
15 chr1:149911400-149914400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr1:149911400-149914600 Enhancers HUES6 Cell Line embryonic stem cell
17 chr1:149911400-149914600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:149911400-149915000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:149911400-149915200 Enhancers HUES64 Cell Line embryonic stem cell
20 chr1:149911400-149915400 Weak transcription Primary T cells fromperipheralblood blood
21 chr1:149911400-149915400 Weak transcription Right Ventricle heart
22 chr1:149911400-149915600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:149911400-149915600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:149911400-149915600 Weak transcription NHLF lung
25 chr1:149911400-149915800 Weak transcription H9 Cell Line embryonic stem cell
26 chr1:149911400-149916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:149911400-149916200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr1:149911400-149917200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:149911400-149933800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:149911600-149914400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:149911600-149914800 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:149911600-149914800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:149911600-149914800 Weak transcription Fetal Stomach stomach
34 chr1:149911600-149914800 Weak transcription HSMMtube muscle
35 chr1:149911600-149915400 Weak transcription Fetal Muscle Leg muscle
36 chr1:149911600-149915400 Weak transcription GM12878-XiMat blood
37 chr1:149911600-149915600 Weak transcription Colon Smooth Muscle Colon
38 chr1:149911600-149915600 Weak transcription Duodenum Mucosa Duodenum
39 chr1:149911600-149915600 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:149911600-149915800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:149911600-149916000 Weak transcription Aorta Aorta
42 chr1:149911600-149916600 Weak transcription HSMM muscle
43 chr1:149911800-149914800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:149911800-149914800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:149911800-149914800 Weak transcription Fetal Muscle Trunk muscle
46 chr1:149911800-149914800 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:149911800-149915000 Weak transcription Brain Anterior Caudate brain
48 chr1:149911800-149915400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:149911800-149915400 Weak transcription Left Ventricle heart
50 chr1:149911800-149915400 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015