Variant report

Variant	rs10736985
Chromosome Location	chr10:4151295-4151296
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17131994	1.00[AMR][1000 genomes]
rs7067895	1.00[AMR][1000 genomes]
rs7071392	0.80[AFR][1000 genomes]
rs7080390	1.00[AMR][1000 genomes]
rs7091315	1.00[AMR][1000 genomes]
rs74117032	1.00[AMR][1000 genomes]
rs74117034	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051297	chr10:3908706-4277678	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv831772	chr10:4039292-4212218	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4145800-4153400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr10:4146400-4152400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:4146600-4153400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:4147200-4152800	Weak transcription	Hela-S3	cervix
5	chr10:4149400-4151600	Enhancers	Adipose Nuclei	Adipose
6	chr10:4150000-4151600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr10:4150800-4151400	Enhancers	Primary B cells from cord blood	blood
8	chr10:4151000-4151600	Enhancers	Primary B cells from peripheral blood	blood
9	chr10:4151000-4152000	Enhancers	HUVEC	blood vessel
10	chr10:4151200-4151600	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr10:4151200-4152000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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