Variant report

Variant	rs7067895
Chromosome Location	chr10:4164720-4164721
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:3826233..3829471-chr10:4161588..4164936,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000067082	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10736985	1.00[AMR][1000 genomes]
rs17131994	1.00[AMR][1000 genomes]
rs7080390	1.00[AMR][1000 genomes]
rs7091315	1.00[AMR][1000 genomes]
rs74117032	1.00[AMR][1000 genomes]
rs74117034	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051297	chr10:3908706-4277678	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv831772	chr10:4039292-4212218	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4162800-4164800	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr10:4162800-4165400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr10:4162800-4165800	Enhancers	Fetal Lung	lung
4	chr10:4163000-4166800	Weak transcription	Pancreas	Pancrea
5	chr10:4163000-4173400	Weak transcription	NHLF	lung
6	chr10:4163600-4164800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr10:4163600-4165200	Enhancers	Fetal Muscle Leg	muscle
8	chr10:4163600-4165200	Enhancers	Stomach Mucosa	stomach
9	chr10:4163800-4164800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr10:4164000-4165200	Weak transcription	Right Ventricle	heart
11	chr10:4164000-4167000	Weak transcription	Left Ventricle	heart
12	chr10:4164000-4170000	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr10:4164200-4164800	Enhancers	Primary B cells from cord blood	blood
14	chr10:4164200-4165000	Enhancers	Primary B cells from peripheral blood	blood
15	chr10:4164200-4165600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr10:4164400-4164800	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr10:4164400-4165000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr10:4164400-4165000	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr10:4164400-4166000	Enhancers	Fetal Heart	heart
20	chr10:4164400-4169600	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr10:4164600-4169600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

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