Variant report

Variant	rs10739954
Chromosome Location	chr9:96521923-96521924
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10116474	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10739953	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10761263	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10761265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10761275	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10761276	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10761277	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10761280	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10821225	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10821226	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10821227	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12000834	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1987047	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2398873	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7030496	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7047782	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7048019	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96520200-96523000	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr9:96520400-96522000	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr9:96520600-96522200	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr9:96520600-96522600	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr9:96520600-96522600	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr9:96521600-96522000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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