Variant report

Variant	rs10751010
Chromosome Location	chr11:64258427-64258428
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:64256445..64261724-chr11:64264321..64268271,6	K562	blood:
2	chr11:64122686..64124418-chr11:64257957..64260838,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168071	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10751011	1.00[MEX][hapmap]
rs1207462	1.00[MEX][hapmap]
rs1212851	1.00[MEX][hapmap]
rs12294207	1.00[MEX][hapmap]
rs17146119	1.00[MEX][hapmap]
rs17159320	1.00[MEX][hapmap]
rs17159321	1.00[MEX][hapmap]
rs240690	1.00[MEX][hapmap]
rs470348	1.00[MEX][hapmap]
rs475704	1.00[MEX][hapmap]
rs497544	1.00[MEX][hapmap]
rs512926	1.00[MEX][hapmap]
rs519106	1.00[MEX][hapmap]
rs545819	1.00[MEX][hapmap]
rs558073	1.00[MEX][hapmap]
rs605597	1.00[MEX][hapmap]
rs6591854	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7123003	1.00[MEX][hapmap]
rs73488255	1.00[AMR][1000 genomes]
rs73488290	1.00[AMR][1000 genomes]
rs73488302	1.00[AMR][1000 genomes]
rs73490204	1.00[AMR][1000 genomes]
rs73490208	1.00[AMR][1000 genomes]
rs73490209	1.00[AMR][1000 genomes]
rs73490219	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490222	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73492137	1.00[AMR][1000 genomes]
rs73492160	1.00[AMR][1000 genomes]
rs73492200	1.00[AMR][1000 genomes]
rs7948607	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1035485	chr11:64228847-64354869	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64257000-64258600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr11:64257000-64258600	Enhancers	Fetal Thymus	thymus
3	chr11:64257200-64258600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr11:64257200-64258600	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
5	chr11:64257200-64258600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr11:64257400-64258600	Enhancers	Primary B cells from peripheral blood	blood
7	chr11:64257400-64258600	Enhancers	Primary T helper naive cells from peripheral blood	blood
8	chr11:64257400-64258600	Enhancers	Thymus	Thymus
9	chr11:64257600-64258600	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
10	chr11:64257600-64258800	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr11:64257800-64258600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
12	chr11:64257800-64259400	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr11:64257800-64259600	Weak transcription	Primary B cells from cord blood	blood
14	chr11:64257800-64260400	Weak transcription	Primary hematopoietic stem cells	blood
15	chr11:64258000-64258600	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
16	chr11:64258000-64258600	Enhancers	Fetal Brain Female	brain
17	chr11:64258200-64258600	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
18	chr11:64258200-64258600	Bivalent Enhancer	GM12878-XiMat	blood
19	chr11:64258200-64258800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
20	chr11:64258200-64259000	Enhancers	Primary T helper cells PMA-I stimulated	--
21	chr11:64258400-64258600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
22	chr11:64258400-64258600	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle

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