The 2.0 version of rSNPBase

Variant report

Variant rs10753121
Chromosome Location chr1:171475287-171475288
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171456000-171481800 Weak transcription Placenta Placenta
2 chr1:171456400-171481800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr1:171456400-171483600 Weak transcription Fetal Intestine Large intestine
4 chr1:171457800-171482000 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:171457800-171482200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:171459000-171482000 Weak transcription HMEC breast
7 chr1:171460800-171481400 Weak transcription HSMM muscle
8 chr1:171462600-171478000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:171462600-171482400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:171463000-171483200 Weak transcription Fetal Muscle Leg muscle
11 chr1:171464000-171483200 Weak transcription Esophagus oesophagus
12 chr1:171464200-171476000 Weak transcription NHDF-Ad bronchial
13 chr1:171464200-171476800 Weak transcription Brain Angular Gyrus brain
14 chr1:171464200-171481600 Weak transcription NHEK skin
15 chr1:171464400-171475400 Weak transcription NH-A brain
16 chr1:171465000-171476200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:171465200-171475400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:171465200-171481800 Weak transcription HUVEC blood vessel
19 chr1:171465200-171482200 Weak transcription Fetal Lung lung
20 chr1:171465200-171483200 Weak transcription NHLF lung
21 chr1:171465200-171483600 Weak transcription Stomach Smooth Muscle stomach
22 chr1:171466200-171475600 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:171466400-171475600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:171466800-171476200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:171468000-171482200 Weak transcription Hela-S3 cervix
26 chr1:171468200-171475400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:171468200-171475600 Weak transcription A549 lung
28 chr1:171468400-171483200 Weak transcription Fetal Muscle Trunk muscle
29 chr1:171468800-171483600 Weak transcription Gastric stomach
30 chr1:171469000-171483600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:171469400-171481400 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr1:171469600-171482200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:171470000-171475600 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:171470200-171481200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr1:171470200-171481600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr1:171470200-171482800 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr1:171470600-171476400 Weak transcription H1 Cell Line embryonic stem cell
38 chr1:171470600-171482200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:171470600-171483600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:171470600-171491600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:171470800-171475600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:171470800-171481400 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr1:171470800-171482200 Weak transcription Primary hematopoietic stem cells blood
44 chr1:171471400-171475400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:171471400-171476800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:171471400-171483200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:171471400-171485800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:171471600-171475400 Enhancers Primary T cells fromperipheralblood blood
49 chr1:171471600-171483200 Weak transcription Fetal Brain Female brain
50 chr1:171471600-171483600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015