Variant report

Variant	rs10763120
Chromosome Location	chr10:56375357-56375358
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10763118	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs10763119	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs1892344	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs1930158	0.93[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap]
rs1937410	0.85[CHB][hapmap];0.95[CHD][hapmap];0.89[JPT][hapmap];0.89[ASN][1000 genomes]
rs1937413	0.92[CHB][hapmap];0.88[JPT][hapmap]
rs1937415	0.93[CHB][hapmap];0.89[JPT][hapmap]
rs1937417	1.00[JPT][hapmap]
rs2026409	1.00[JPT][hapmap]
rs2026410	0.82[CHD][hapmap];1.00[JPT][hapmap]
rs2026411	1.00[JPT][hapmap]
rs2026412	1.00[JPT][hapmap]
rs2026413	1.00[JPT][hapmap]
rs2154267	0.89[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2384473	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs4503435	1.00[JPT][hapmap]
rs4935525	0.81[CHB][hapmap]
rs6481106	1.00[JPT][hapmap]
rs6481107	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs7089865	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs7092655	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs7901268	0.83[CHB][hapmap]
rs951435	0.93[CHB][hapmap];1.00[JPT][hapmap]
rs984915	0.88[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050405	chr10:56224676-56800009	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv540635	chr10:56224676-56800009	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv933410	chr10:56319433-56713977	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1043144	chr10:56332903-56680265	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
5	nsv1045621	chr10:56353504-56468425	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
6	nsv550970	chr10:56361499-56764751	Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases
7	nsv467229	chr10:56375357-56411659	Enhancers Weak transcription Flanking Active TSS Active TSS	lncRNA	n/a	inside rSNPs	diseases
8	nsv550971	chr10:56375357-56411659	Active TSS Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:56373800-56381200	Weak transcription	HUVEC	blood vessel
2	chr10:56374000-56381200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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