Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10766234	0.82[ASN][1000 genomes]
rs10766235	0.82[ASN][1000 genomes]
rs11023529	0.82[ASN][1000 genomes]
rs11023533	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11023539	0.89[AFR][1000 genomes]
rs12794836	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4237705	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4356209	0.86[AFR][1000 genomes]
rs4381353	0.86[AFR][1000 genomes]
rs4548599	0.82[ASN][1000 genomes]
rs4622244	0.90[ASN][1000 genomes]
rs4756805	0.82[ASN][1000 genomes]
rs4757307	0.97[ASN][1000 genomes]
rs55735037	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61878035	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6486240	0.91[AFR][1000 genomes]
rs7105245	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7111340	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7125905	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7479972	0.84[AFR][1000 genomes]
rs7927667	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830370	chr11:15142247-15444094	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv832072	chr11:15226843-15392190	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv1044103	chr11:15345545-15390081	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15385000-15388800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr11:15385200-15388000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr11:15387000-15387400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:15387200-15387400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr11:15387200-15387400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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