Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr1:95592547-95592723	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:95588124..95590030-chr1:95591638..95593797,2	K562	blood:

Variant related genes	Relation type
ENSG00000206679	TF binding region

rSNPs within LD-proxies of this variant (count:13)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830636	chr1:95495849-95703126	Strong transcription Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv870669	chr1:95586773-95690269	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95584000-95592600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:95584000-95629400	Weak transcription	Aorta	Aorta
3	chr1:95584400-95603400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr1:95584600-95602200	Weak transcription	Right Ventricle	heart
5	chr1:95585400-95636800	Weak transcription	Colon Smooth Muscle	Colon
6	chr1:95588200-95594200	Weak transcription	A549	lung
7	chr1:95588200-95596600	Weak transcription	Pancreas	Pancrea
8	chr1:95588200-95599600	Weak transcription	Gastric	stomach
9	chr1:95588200-95608000	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr1:95588400-95597800	Weak transcription	Fetal Heart	heart
11	chr1:95590000-95611000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr1:95591000-95593000	Weak transcription	HepG2	liver
13	chr1:95591800-95602800	Enhancers	Liver	Liver
14	chr1:95592000-95592800	Enhancers	Rectal Mucosa Donor 31	rectum
15	chr1:95592200-95592800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr1:95592200-95592800	Enhancers	Fetal Intestine Large	intestine
17	chr1:95592200-95592800	Enhancers	Left Ventricle	heart
18	chr1:95592200-95592800	Enhancers	Psoas Muscle	Psoas
19	chr1:95592200-95592800	Enhancers	Skeletal Muscle Female	skeletal muscle
20	chr1:95592200-95593200	Genic enhancers	K562	blood

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