Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10506432	0.90[CEU][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes]
rs10506436	1.00[CEU][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10747951	0.90[CEU][hapmap];0.82[JPT][hapmap];0.80[AMR][1000 genomes]
rs10784280	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs10877783	0.95[JPT][hapmap]
rs10877784	0.92[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs10877785	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs10877786	0.90[CEU][hapmap];0.82[JPT][hapmap];0.81[AMR][1000 genomes]
rs10877787	0.89[CEU][hapmap];0.85[JPT][hapmap];0.80[AMR][1000 genomes]
rs11174294	0.89[CEU][hapmap];0.85[JPT][hapmap]
rs11174296	0.89[CEU][hapmap];0.85[JPT][hapmap]
rs1373458	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs1373459	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs1373460	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs36102522	0.97[ASN][1000 genomes]
rs3852565	0.97[ASN][1000 genomes]
rs3852566	0.91[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs9668144	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs9669425	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs9706516	0.82[JPT][hapmap];0.80[AMR][1000 genomes]
rs9738190	0.89[CEU][hapmap];0.85[JPT][hapmap]
rs9739464	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9739867	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs9739956	0.90[CEU][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv832435	chr12:62407000-62601835	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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