Variant report

Variant rs10789464
Chromosome Location chr1:45959102-45959103
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45956800-45964600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:45956800-45964800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:45956800-45964800 Weak transcription Spleen Spleen
4 chr1:45956800-45965000 Weak transcription Gastric stomach
5 chr1:45956800-45974000 Weak transcription Small Intestine intestine
6 chr1:45957000-45962600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:45957000-45964200 Weak transcription Pancreas Pancrea
8 chr1:45957000-45964400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:45957000-45964600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:45957000-45964800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:45957200-45961800 Weak transcription Lung lung
12 chr1:45957200-45964200 Weak transcription K562 blood
13 chr1:45957400-45959800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:45957400-45964000 Weak transcription Brain Hippocampus Middle brain
15 chr1:45957400-45964600 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:45957400-45965200 Weak transcription HSMM muscle
17 chr1:45957600-45959200 Enhancers Primary B cells from peripheral blood blood
18 chr1:45957600-45959600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:45957600-45960800 Weak transcription Primary T cells from cord blood blood
20 chr1:45957600-45961800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:45957600-45962200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:45957600-45964000 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:45957600-45964000 Weak transcription Brain Cingulate Gyrus brain
24 chr1:45957600-45964200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:45957600-45964200 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:45957600-45964200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:45957600-45964400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:45957600-45964600 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:45957600-45964600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:45957600-45964600 Weak transcription Ovary ovary
31 chr1:45957600-45964600 Weak transcription Thymus Thymus
32 chr1:45957600-45964600 Weak transcription Osteobl bone
33 chr1:45957600-45964800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:45957600-45964800 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:45957600-45964800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:45957600-45965000 Weak transcription Psoas Muscle Psoas
37 chr1:45957800-45959800 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:45957800-45960200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:45957800-45960200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:45957800-45961800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:45957800-45961800 Weak transcription Esophagus oesophagus
42 chr1:45957800-45961800 Weak transcription Left Ventricle heart
43 chr1:45957800-45961800 Weak transcription Right Atrium heart
44 chr1:45957800-45961800 Weak transcription NHEK skin
45 chr1:45957800-45962000 Weak transcription Placenta Placenta
46 chr1:45957800-45962200 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:45957800-45962200 Weak transcription Fetal Stomach stomach
48 chr1:45957800-45964000 Weak transcription Liver Liver
49 chr1:45957800-45964000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:45957800-45964000 Weak transcription Brain Substantia Nigra brain

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