Variant report

Variant rs3790583
Chromosome Location chr1:45956828-45956829
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45955000-45957400 Active TSS Brain Inferior Temporal Lobe brain
2 chr1:45955000-45957600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:45955200-45957400 Active TSS H9 Cell Line embryonic stem cell
4 chr1:45955200-45957400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:45955200-45957400 Active TSS Brain Cingulate Gyrus brain
6 chr1:45955200-45957600 Active TSS HUES48 Cell Line embryonic stem cell
7 chr1:45955200-45957600 Active TSS Colonic Mucosa Colon
8 chr1:45955400-45957000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:45955400-45957200 Active TSS Primary T killer memory cells from peripheral blood blood
10 chr1:45955400-45957200 Active TSS Brain Angular Gyrus brain
11 chr1:45955400-45957200 Active TSS Rectal Mucosa Donor 31 rectum
12 chr1:45955400-45957400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
13 chr1:45955400-45957600 Active TSS Fetal Intestine Large intestine
14 chr1:45955400-45957600 Active TSS Fetal Kidney kidney
15 chr1:45955400-45957600 Active TSS Ovary ovary
16 chr1:45955600-45957000 Active TSS Pancreas Pancrea
17 chr1:45955600-45957200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:45955600-45957200 Active TSS Placenta Placenta
19 chr1:45955600-45957400 Active TSS Pancreatic Islets Pancreatic Islet
20 chr1:45955600-45957400 Active TSS Rectal Mucosa Donor 29 rectum
21 chr1:45955600-45957600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:45955600-45957600 Active TSS Colon Smooth Muscle Colon
23 chr1:45955600-45957600 Active TSS Right Atrium heart
24 chr1:45955600-45957600 Active TSS Right Ventricle heart
25 chr1:45955800-45957200 Active TSS Esophagus oesophagus
26 chr1:45955800-45957200 Active TSS Lung lung
27 chr1:45955800-45957400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:45955800-45957400 Active TSS Aorta Aorta
29 chr1:45955800-45957400 Active TSS Fetal Intestine Small intestine
30 chr1:45955800-45957400 Active TSS Left Ventricle heart
31 chr1:45955800-45957400 Active TSS GM12878-XiMat blood
32 chr1:45955800-45957400 Active TSS HMEC breast
33 chr1:45955800-45957400 Active TSS NHEK skin
34 chr1:45955800-45957600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:45955800-45957600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:45955800-45957600 Active TSS Duodenum Mucosa Duodenum
37 chr1:45955800-45957600 Active TSS Psoas Muscle Psoas
38 chr1:45955800-45957800 Active TSS Brain Substantia Nigra brain
39 chr1:45955800-45957800 Active TSS NHDF-Ad bronchial
40 chr1:45956000-45957000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:45956000-45957000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:45956000-45957000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
43 chr1:45956000-45957000 Active TSS Primary monocytes fromperipheralblood blood
44 chr1:45956000-45957200 Active TSS Primary B cells from peripheral blood blood
45 chr1:45956000-45957200 Active TSS Liver Liver
46 chr1:45956000-45957200 Active TSS Skeletal Muscle Male skeletal muscle
47 chr1:45956000-45957400 Active TSS iPS-15b Cell Line embryonic stem cell
48 chr1:45956000-45957400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:45956000-45957400 Active TSS Brain Anterior Caudate brain
50 chr1:45956000-45957400 Active TSS Brain Hippocampus Middle brain

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