Variant report

Variant	rs10793159
Chromosome Location	chr11:76118450-76118451
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10793157	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10793160	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11236741	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1893870	0.93[AMR][1000 genomes]
rs2156708	0.83[AMR][1000 genomes]
rs58882982	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7927830	0.82[AMR][1000 genomes]
rs868124	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs871911	0.83[AMR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10793159	RP11-111M22.2	cis	Thyroid	GTEx

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76097200-76122000	Weak transcription	Fetal Stomach	stomach
2	chr11:76111000-76119200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:76115600-76119600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr11:76118200-76120200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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