The 2.0 version of rSNPBase

Variant report

Variant rs10797090
Chromosome Location chr1:153624791-153624792
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153618400-153625400 Weak transcription Small Intestine intestine
2 chr1:153618400-153630800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:153618400-153631200 Weak transcription Aorta Aorta
4 chr1:153618600-153631000 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:153618600-153631000 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:153618800-153625000 Weak transcription Hela-S3 cervix
7 chr1:153618800-153625000 Weak transcription HUVEC blood vessel
8 chr1:153618800-153625200 Weak transcription NHDF-Ad bronchial
9 chr1:153618800-153625400 Weak transcription NH-A brain
10 chr1:153618800-153626400 Weak transcription HepG2 liver
11 chr1:153618800-153630800 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:153619000-153625000 Weak transcription Colonic Mucosa Colon
13 chr1:153619200-153630800 Weak transcription Fetal Kidney kidney
14 chr1:153619400-153625000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:153619400-153625200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:153619600-153625000 Weak transcription HMEC breast
17 chr1:153619600-153625000 Weak transcription Osteobl bone
18 chr1:153619600-153625400 Weak transcription Primary hematopoietic stem cells blood
19 chr1:153619600-153630800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:153619800-153625200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:153619800-153625200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:153619800-153625200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:153620000-153625000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:153620000-153625000 Weak transcription NHEK skin
25 chr1:153620000-153625200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:153620000-153625200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:153620000-153630400 Weak transcription Dnd41 blood
28 chr1:153620000-153630400 Weak transcription GM12878-XiMat blood
29 chr1:153620200-153625000 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr1:153620200-153625000 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:153620200-153625000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:153620200-153625200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:153620200-153625200 Weak transcription A549 lung
34 chr1:153620200-153625200 Weak transcription NHLF lung
35 chr1:153620200-153630400 Weak transcription Primary B cells from peripheral blood blood
36 chr1:153620200-153630400 Weak transcription Duodenum Mucosa Duodenum
37 chr1:153620200-153630600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:153620200-153630600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:153620200-153630600 Weak transcription Primary B cells from cord blood blood
40 chr1:153620200-153631000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:153620200-153631000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:153620800-153625000 Weak transcription Primary monocytes fromperipheralblood blood
43 chr1:153620800-153625000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr1:153620800-153630800 Weak transcription Fetal Stomach stomach
45 chr1:153622200-153625000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:153622400-153625000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:153622400-153625000 Weak transcription Fetal Intestine Large intestine
48 chr1:153622400-153625200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:153622600-153625000 Weak transcription Fetal Intestine Small intestine
50 chr1:153622600-153625200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015