Variant report

Variant rs28380060
Chromosome Location chr1:153605909-153605910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153600000-153606600 Weak transcription Aorta Aorta
2 chr1:153600200-153606000 Enhancers Fetal Intestine Small intestine
3 chr1:153600400-153606000 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr1:153600400-153606000 Weak transcription Fetal Brain Male brain
5 chr1:153600400-153606000 Enhancers Fetal Intestine Large intestine
6 chr1:153600400-153606400 Weak transcription Small Intestine intestine
7 chr1:153600800-153606400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:153601200-153606000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:153601400-153606000 Weak transcription Brain Angular Gyrus brain
10 chr1:153601600-153606000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:153602000-153606000 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:153602200-153606000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:153602200-153606400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:153602600-153606000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:153602800-153606400 Enhancers Sigmoid Colon Sigmoid Colon
16 chr1:153603000-153606000 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:153603000-153606600 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:153603400-153606000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:153603400-153606000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:153603600-153606000 Weak transcription Fetal Stomach stomach
21 chr1:153604000-153606000 Enhancers Primary monocytes fromperipheralblood blood
22 chr1:153604200-153606000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:153604400-153606000 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:153605000-153606000 Enhancers Right Atrium heart
25 chr1:153605000-153606200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
26 chr1:153605000-153606200 Enhancers HepG2 liver
27 chr1:153605200-153606000 Enhancers Colonic Mucosa Colon
28 chr1:153605200-153606000 Enhancers Lung lung
29 chr1:153605200-153606000 Enhancers Psoas Muscle Psoas
30 chr1:153605200-153606000 Enhancers Stomach Mucosa stomach
31 chr1:153605200-153606200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:153605200-153606400 Enhancers Spleen Spleen
33 chr1:153605200-153606400 Flanking Active TSS Hela-S3 cervix
34 chr1:153605400-153606000 Enhancers Left Ventricle heart
35 chr1:153605600-153606000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:153605600-153606000 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr1:153605600-153606000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr1:153605600-153606000 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr1:153605600-153606000 Enhancers Esophagus oesophagus
40 chr1:153605600-153606000 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr1:153605600-153606000 ZNF genes & repeats Fetal Brain Female brain
42 chr1:153605600-153606000 Enhancers Fetal Muscle Trunk muscle
43 chr1:153605600-153606000 Enhancers Fetal Muscle Leg muscle
44 chr1:153605600-153606000 Enhancers Placenta Placenta
45 chr1:153605600-153606000 Enhancers Gastric stomach
46 chr1:153605600-153606000 Enhancers NHLF lung
47 chr1:153605600-153606200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:153605600-153606200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:153605600-153606200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:153605600-153606200 Flanking Active TSS Adipose Nuclei Adipose

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