Variant report

Variant rs3790412
Chromosome Location chr1:153616857-153616858
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153608200-153618600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:153608200-153618800 Strong transcription HUES6 Cell Line embryonic stem cell
3 chr1:153608200-153619600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:153608400-153618600 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr1:153608400-153618800 Strong transcription H9 Cell Line embryonic stem cell
6 chr1:153608400-153618800 Strong transcription iPS-20b Cell Line embryonic stem cell
7 chr1:153608400-153619200 Strong transcription HUES48 Cell Line embryonic stem cell
8 chr1:153608400-153619200 Strong transcription iPS-18 Cell Line embryonic stem cell
9 chr1:153608400-153619800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:153608600-153618600 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr1:153608600-153618800 Strong transcription HUVEC blood vessel
12 chr1:153608600-153619400 Strong transcription H1 Cell Line embryonic stem cell
13 chr1:153608600-153619400 Strong transcription Osteobl bone
14 chr1:153608600-153619600 Strong transcription Primary hematopoietic stem cells blood
15 chr1:153608600-153619600 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr1:153608600-153619600 Strong transcription HMEC breast
17 chr1:153608600-153620200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:153608600-153620200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:153608800-153618400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:153608800-153618800 Strong transcription iPS-15b Cell Line embryonic stem cell
21 chr1:153608800-153619400 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr1:153608800-153619800 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr1:153608800-153620200 Strong transcription Fetal Thymus thymus
24 chr1:153609000-153617000 Strong transcription ES-I3 Cell Line embryonic stem cell
25 chr1:153609000-153618600 Strong transcription Placenta Amnion Placenta Amnion
26 chr1:153609200-153617600 Strong transcription Primary monocytes fromperipheralblood blood
27 chr1:153609200-153618800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:153609200-153619400 Strong transcription Spleen Spleen
29 chr1:153609200-153620000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:153609200-153620000 Strong transcription Fetal Brain Female brain
31 chr1:153609200-153620200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:153609400-153618800 Strong transcription Fetal Lung lung
33 chr1:153609400-153618800 Strong transcription NH-A brain
34 chr1:153609400-153619000 Strong transcription Thymus Thymus
35 chr1:153609600-153617000 Strong transcription Primary T cells from cord blood blood
36 chr1:153609600-153617400 Strong transcription Ovary ovary
37 chr1:153609600-153618000 Strong transcription Primary B cells from cord blood blood
38 chr1:153609600-153618800 Strong transcription Placenta Placenta
39 chr1:153609600-153618800 Strong transcription K562 blood
40 chr1:153609600-153618800 Strong transcription NHDF-Ad bronchial
41 chr1:153609600-153619000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:153609600-153619200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:153609600-153619200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:153609600-153619400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:153609600-153619400 Strong transcription Rectal Smooth Muscle rectum
46 chr1:153609600-153619400 Strong transcription Sigmoid Colon Sigmoid Colon
47 chr1:153609600-153619800 Weak transcription Right Atrium heart
48 chr1:153609600-153620000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:153609600-153620000 Strong transcription Brain Germinal Matrix brain
50 chr1:153609600-153620000 Strong transcription Rectal Mucosa Donor 29 rectum

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