The 2.0 version of rSNPBase

Variant report

Variant rs10798650
Chromosome Location chr1:179040646-179040647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179008400-179041000 Weak transcription Small Intestine intestine
2 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:179025000-179050200 Weak transcription HUVEC blood vessel
6 chr1:179025400-179050600 Weak transcription Fetal Brain Male brain
7 chr1:179025600-179050000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:179025600-179050400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:179025800-179050200 Weak transcription Fetal Heart heart
10 chr1:179027800-179042600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:179027800-179050600 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:179028600-179050000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr1:179028600-179050600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:179029600-179043200 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr1:179032600-179043200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:179032600-179043200 Strong transcription Fetal Muscle Trunk muscle
17 chr1:179032800-179041600 Strong transcription Primary monocytes fromperipheralblood blood
18 chr1:179032800-179043600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:179033000-179041800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:179033000-179043600 Strong transcription Fetal Muscle Leg muscle
21 chr1:179033800-179041000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr1:179033800-179041000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:179033800-179042800 Weak transcription HMEC breast
24 chr1:179033800-179050000 Weak transcription Esophagus oesophagus
25 chr1:179034000-179050000 Weak transcription H9 Cell Line embryonic stem cell
26 chr1:179034200-179050000 Weak transcription Colonic Mucosa Colon
27 chr1:179034200-179050000 Weak transcription Fetal Kidney kidney
28 chr1:179034800-179041000 Weak transcription Rectal Smooth Muscle rectum
29 chr1:179035000-179042200 Weak transcription Psoas Muscle Psoas
30 chr1:179035200-179041000 Weak transcription Gastric stomach
31 chr1:179035200-179041000 Weak transcription Pancreas Pancrea
32 chr1:179035400-179040800 Weak transcription Brain Angular Gyrus brain
33 chr1:179035400-179050000 Weak transcription Fetal Lung lung
34 chr1:179035600-179041000 Weak transcription NH-A brain
35 chr1:179036000-179041000 Weak transcription Primary B cells from cord blood blood
36 chr1:179036000-179046800 Weak transcription NHLF lung
37 chr1:179036200-179040800 Weak transcription NHDF-Ad bronchial
38 chr1:179036200-179041000 Weak transcription Aorta Aorta
39 chr1:179036200-179041000 Weak transcription Brain Anterior Caudate brain
40 chr1:179036200-179041000 Weak transcription Brain Substantia Nigra brain
41 chr1:179036200-179041000 Weak transcription GM12878-XiMat blood
42 chr1:179036200-179041200 Weak transcription Brain Cingulate Gyrus brain
43 chr1:179036200-179046400 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:179036200-179049200 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr1:179036200-179050200 Weak transcription H1 Cell Line embryonic stem cell
46 chr1:179036200-179050800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:179036400-179041000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr1:179036400-179041200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:179036400-179041800 Weak transcription HSMMtube muscle
50 chr1:179036400-179049200 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015