Variant report

Variant rs10798661
Chromosome Location chr1:171787182-171787183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171770200-171794600 Weak transcription Primary T cells from cord blood blood
2 chr1:171773000-171796000 Weak transcription Pancreas Pancrea
3 chr1:171784600-171787200 Weak transcription Brain Angular Gyrus brain
4 chr1:171785400-171787200 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:171785400-171787800 Enhancers ES-I3 Cell Line embryonic stem cell
6 chr1:171785800-171787600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:171786000-171787400 Enhancers iPS-15b Cell Line embryonic stem cell
8 chr1:171786000-171787600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:171786000-171787600 Enhancers NHEK skin
10 chr1:171786000-171787800 Enhancers Hela-S3 cervix
11 chr1:171786200-171787400 Enhancers Pancreatic Islets Pancreatic Islet
12 chr1:171786200-171787600 Enhancers H1 Cell Line embryonic stem cell
13 chr1:171786200-171787600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:171786200-171787600 Enhancers Brain Inferior Temporal Lobe brain
15 chr1:171786200-171787800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:171786200-171787800 Enhancers Brain Substantia Nigra brain
17 chr1:171786200-171788000 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr1:171786400-171787200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:171786400-171787400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:171786400-171787400 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr1:171786400-171787400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr1:171786400-171787400 Enhancers Placenta Amnion Placenta Amnion
23 chr1:171786400-171787400 Enhancers HUVEC blood vessel
24 chr1:171786400-171787400 Enhancers NH-A brain
25 chr1:171786400-171787400 Enhancers NHLF lung
26 chr1:171786400-171787600 Enhancers HUES48 Cell Line embryonic stem cell
27 chr1:171786400-171787600 Enhancers HUES64 Cell Line embryonic stem cell
28 chr1:171786400-171787600 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr1:171786400-171787600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:171786400-171787600 Enhancers Brain Anterior Caudate brain
31 chr1:171786400-171787600 Flanking Active TSS A549 lung
32 chr1:171786400-171787600 Enhancers HMEC breast
33 chr1:171786400-171787800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:171786400-171787800 Enhancers Brain Hippocampus Middle brain
35 chr1:171786400-171787800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr1:171786400-171787800 Enhancers HSMMtube muscle
37 chr1:171786400-171787800 Enhancers K562 blood
38 chr1:171786600-171787200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:171786600-171787200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:171786600-171787200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:171786600-171787400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:171786600-171787400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:171786600-171787400 Enhancers Skeletal Muscle Male skeletal muscle
44 chr1:171786600-171787400 Enhancers HSMM muscle
45 chr1:171786600-171787400 Enhancers Osteobl bone
46 chr1:171786600-171787800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:171786600-171787800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:171786800-171787200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:171786800-171787400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:171786800-171787400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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