Variant report

Variant rs6690544
Chromosome Location chr1:171776722-171776723
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171766200-171777200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:171766400-171777200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:171767000-171777200 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr1:171767000-171778600 Weak transcription NHEK skin
5 chr1:171767200-171777600 Weak transcription HMEC breast
6 chr1:171767400-171777200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:171767800-171778800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:171767800-171781800 Weak transcription Thymus Thymus
9 chr1:171768000-171778600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:171768400-171785600 Weak transcription Gastric stomach
11 chr1:171770200-171794600 Weak transcription Primary T cells from cord blood blood
12 chr1:171770600-171784800 Weak transcription Primary B cells from cord blood blood
13 chr1:171771400-171776800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:171771800-171777200 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:171773000-171796000 Weak transcription Pancreas Pancrea
16 chr1:171774600-171777000 Enhancers Primary B cells from peripheral blood blood
17 chr1:171774800-171777600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:171775000-171787000 Weak transcription Left Ventricle heart
19 chr1:171775200-171778000 Weak transcription Aorta Aorta
20 chr1:171775200-171778200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:171775400-171777000 Weak transcription Brain Cingulate Gyrus brain
22 chr1:171775400-171777200 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:171775400-171779800 Weak transcription Brain Anterior Caudate brain
24 chr1:171775400-171783800 Weak transcription Brain Angular Gyrus brain
25 chr1:171775600-171777800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:171776000-171777200 Enhancers Brain Hippocampus Middle brain
27 chr1:171776400-171777800 Enhancers Brain Substantia Nigra brain
28 chr1:171776600-171777200 Enhancers Primary hematopoietic stem cells blood
29 chr1:171776600-171777400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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