Variant report

Variant rs2294721
Chromosome Location chr1:171755489-171755490
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171751600-171770800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:171752000-171773600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:171752200-171759200 Weak transcription Fetal Heart heart
4 chr1:171752200-171762200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:171752200-171766600 Strong transcription HUES6 Cell Line embryonic stem cell
6 chr1:171752200-171767400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:171752200-171768200 Strong transcription Fetal Muscle Trunk muscle
8 chr1:171752400-171755600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:171752400-171766600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:171752400-171767200 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr1:171752600-171755600 Genic enhancers Skeletal Muscle Female skeletal muscle
12 chr1:171752600-171756400 Strong transcription NHEK skin
13 chr1:171752600-171760000 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:171752600-171767000 Strong transcription HUES64 Cell Line embryonic stem cell
15 chr1:171752600-171767000 Strong transcription iPS-20b Cell Line embryonic stem cell
16 chr1:171752600-171767400 Strong transcription Primary B cells from cord blood blood
17 chr1:171752600-171767400 Strong transcription A549 lung
18 chr1:171752600-171767800 Strong transcription H1 Cell Line embryonic stem cell
19 chr1:171752600-171767800 Strong transcription iPS-18 Cell Line embryonic stem cell
20 chr1:171752800-171755600 Genic enhancers Skeletal Muscle Male skeletal muscle
21 chr1:171752800-171755800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:171752800-171756000 Genic enhancers Primary T cells fromperipheralblood blood
23 chr1:171752800-171756000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr1:171752800-171757200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:171752800-171757800 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:171752800-171761800 Strong transcription iPS-15b Cell Line embryonic stem cell
27 chr1:171752800-171762600 Strong transcription Fetal Stomach stomach
28 chr1:171752800-171765800 Strong transcription ES-I3 Cell Line embryonic stem cell
29 chr1:171752800-171766600 Strong transcription Placenta Placenta
30 chr1:171752800-171767200 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr1:171752800-171770200 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr1:171753000-171755600 Genic enhancers Primary T helper cells fromperipheralblood blood
33 chr1:171753000-171756000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:171753000-171757800 Strong transcription Brain Cingulate Gyrus brain
35 chr1:171753000-171762000 Strong transcription Colonic Mucosa Colon
36 chr1:171753000-171763400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:171753000-171766200 Strong transcription Brain Substantia Nigra brain
38 chr1:171753000-171766800 Strong transcription H9 Cell Line embryonic stem cell
39 chr1:171753000-171766800 Strong transcription Brain Hippocampus Middle brain
40 chr1:171753000-171767200 Strong transcription Fetal Lung lung
41 chr1:171753000-171767600 Strong transcription Fetal Intestine Large intestine
42 chr1:171753400-171755800 Strong transcription NHLF lung
43 chr1:171753600-171756000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:171753600-171760400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:171753600-171767800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:171753800-171758200 Strong transcription NH-A brain
47 chr1:171754000-171755600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:171754000-171756400 Strong transcription HMEC breast
49 chr1:171754000-171767200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:171754000-171767600 Strong transcription Cortex derived primary cultured neurospheres brain

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