The 2.0 version of rSNPBase

Variant report

Variant rs10802798
Chromosome Location chr1:239878474-239878475
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:239845000-239879800 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr1:239867400-239879000 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:239867800-239879000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:239868800-239880400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:239869000-239880800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:239870200-239882400 Weak transcription Pancreas Pancrea
7 chr1:239870200-239883000 Weak transcription Fetal Brain Male brain
8 chr1:239870200-239883000 Weak transcription Gastric stomach
9 chr1:239871600-239880600 Weak transcription Thymus Thymus
10 chr1:239872000-239879000 Weak transcription Primary hematopoietic stem cells blood
11 chr1:239872000-239879000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:239875200-239879000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:239875400-239890800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:239875600-239880000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:239876000-239878800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr1:239876800-239880200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:239877000-239880000 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:239877000-239880800 Weak transcription Colon Smooth Muscle Colon
19 chr1:239877600-239878800 Enhancers Dnd41 blood
20 chr1:239877600-239879400 Enhancers Primary T helper cells fromperipheralblood blood
21 chr1:239877800-239879600 Weak transcription Fetal Thymus thymus
22 chr1:239877800-239881200 Enhancers Stomach Mucosa stomach
23 chr1:239878000-239878800 Enhancers Primary T helper cells PMA-I stimulated --
24 chr1:239878000-239879000 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr1:239878000-239879000 Enhancers Duodenum Mucosa Duodenum
26 chr1:239878000-239879600 Enhancers Primary T helper naive cells from peripheral blood blood
27 chr1:239878200-239878800 Weak transcription Primary T cells from cord blood blood
28 chr1:239878200-239880600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:239878200-239880600 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr1:239878200-239891000 Weak transcription Fetal Intestine Small intestine
31 chr1:239878400-239878800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015