The 2.0 version of rSNPBase

Variant report

Variant rs1431719
Chromosome Location chr1:239881203-239881204
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:239870200-239882400 Weak transcription Pancreas Pancrea
2 chr1:239870200-239883000 Weak transcription Fetal Brain Male brain
3 chr1:239870200-239883000 Weak transcription Gastric stomach
4 chr1:239875400-239890800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:239878200-239891000 Weak transcription Fetal Intestine Small intestine
6 chr1:239878800-239881800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
7 chr1:239879000-239881400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:239879000-239882200 Enhancers Primary hematopoietic stem cells blood
9 chr1:239879400-239881600 Flanking Active TSS Primary T cells from cord blood blood
10 chr1:239879400-239882800 Enhancers Primary monocytes fromperipheralblood blood
11 chr1:239879600-239882200 Enhancers Monocytes-CD14+_RO01746 blood
12 chr1:239879800-239882000 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr1:239880000-239881600 Flanking Active TSS Dnd41 blood
14 chr1:239880000-239885800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:239880200-239882200 Enhancers Pancreatic Islets Pancreatic Islet
16 chr1:239880400-239881400 Enhancers Rectal Mucosa Donor 31 rectum
17 chr1:239880400-239881600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
18 chr1:239880400-239881800 Enhancers Sigmoid Colon Sigmoid Colon
19 chr1:239880400-239884000 Active TSS Rectal Mucosa Donor 29 rectum
20 chr1:239880400-239885600 Active TSS Primary T cells fromperipheralblood blood
21 chr1:239880600-239881600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
22 chr1:239880600-239884600 Active TSS Primary T helper 17 cells PMA-I stimulated --
23 chr1:239880800-239882000 Enhancers Colon Smooth Muscle Colon
24 chr1:239880800-239882200 Weak transcription Primary B cells from cord blood blood
25 chr1:239880800-239882800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
26 chr1:239880800-239883800 Active TSS Duodenum Mucosa Duodenum
27 chr1:239881000-239881400 Flanking Active TSS Fetal Thymus thymus
28 chr1:239881000-239881600 Enhancers Stomach Smooth Muscle stomach
29 chr1:239881000-239881600 Enhancers Hela-S3 cervix
30 chr1:239881000-239881800 Enhancers Rectal Smooth Muscle rectum
31 chr1:239881000-239884200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:239881000-239884400 Active TSS Primary T killer memory cells from peripheral blood blood
33 chr1:239881000-239885400 Active TSS Primary T helper naive cells fromperipheralblood blood
34 chr1:239881200-239881400 Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr1:239881200-239881400 Active TSS Thymus Thymus
36 chr1:239881200-239881800 Active TSS Primary T helper naive cells from peripheral blood blood
37 chr1:239881200-239882200 Active TSS Primary T helper cells fromperipheralblood blood
38 chr1:239881200-239882600 Weak transcription Stomach Mucosa stomach
39 chr1:239881200-239883000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:239881200-239883000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:239881200-239884200 Active TSS Primary Natural Killer cells fromperipheralblood blood
42 chr1:239881200-239884400 Active TSS Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015