Variant report
Variant | rs10804031 |
---|---|
Chromosome Location | chr2:190936588-190936589 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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(count:3 , 50 per page) page:
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Variant related genes | Relation type |
---|---|
ENSG00000138381 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs13401889 | 0.89[EUR][1000 genomes] |
rs13420500 | 1.00[CEU][hapmap];0.84[GIH][hapmap];0.91[TSI][hapmap];0.94[EUR][1000 genomes] |
rs1474359 | 0.91[CEU][hapmap] |
rs3762546 | 1.00[CEU][hapmap];0.94[EUR][1000 genomes] |
rs3791783 | 0.90[EUR][1000 genomes] |
rs4853626 | 1.00[CEU][hapmap];0.90[GIH][hapmap];0.91[TSI][hapmap];0.94[EUR][1000 genomes] |
rs57566211 | 0.94[ASN][1000 genomes] |
rs72909328 | 0.89[ASN][1000 genomes] |
rs72909330 | 0.89[ASN][1000 genomes] |
rs7570532 | 0.89[EUR][1000 genomes] |
rs7571669 | 1.00[CEU][hapmap];0.94[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3439178 | chr2:190877215-191124499 | Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 10 gene(s) | inside rSNPs | diseases |