Variant report

Variant	rs10828432
Chromosome Location	chr10:23625768-23625769
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10828429	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10828433	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11013394	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11013406	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3952640	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4259746	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6482266	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7085364	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7906070	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23599800-23632200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:23619600-23631600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:23620800-23629400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr10:23621600-23626200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr10:23621600-23626600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr10:23621600-23626600	Weak transcription	HMEC	breast
7	chr10:23621600-23627200	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr10:23622200-23626800	Weak transcription	NHEK	skin
9	chr10:23622400-23626600	Weak transcription	Hela-S3	cervix
10	chr10:23624000-23628600	Weak transcription	Primary T helper cells PMA-I stimulated	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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