Variant report

Variant	rs7906070
Chromosome Location	chr10:23649989-23649990
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10828429	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10828432	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10828433	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11013394	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11013406	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2036919	0.81[CEU][hapmap]
rs2036920	0.81[CEU][hapmap]
rs2036921	0.81[CEU][hapmap]
rs3952640	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4259746	0.89[ASW][hapmap];0.96[CEU][hapmap];0.92[CHB][hapmap];0.94[CHD][hapmap];0.84[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.93[TSI][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6482266	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7085364	0.96[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23641800-23653600	Weak transcription	HMEC	breast
2	chr10:23647600-23650200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr10:23647600-23650600	Enhancers	NHEK	skin
4	chr10:23648200-23650600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr10:23648200-23652600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr10:23649600-23651400	Enhancers	Duodenum Mucosa	Duodenum
7	chr10:23649800-23650000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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